RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 XIRP2A4UGR9 3374 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 ZNF233A6NK53 670 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SMC2O95347 1197 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 BMP1P13497 986 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 IL9P15248 144 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 HOXB8P17481 243 aaPredicted RBP18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SNRNP35Q16560 246 aaKnown RBP18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 ELMSAN1Q6PJG2 1045 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 CBWD2Q8IUF1 395 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 XXYLT1Q8NBI6 393 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SLC22A17Q8WUG5 538 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 APOL5Q9BWW9 433 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 DPP3Q9NY33 737 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 FNIP2Q9P278 1114 aa18.11■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 GRXCR2A6NFK2 248 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SYN3O14994 580 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 MBTPS2O43462 519 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 EXOC3O60645 756 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 TMEM191BP0C7N4 346 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 WNT7BP56706 349 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 C9orf57Q5W0N0 161 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 ANKS3Q6ZW76 656 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 PALB2Q86YC2 1186 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 RDH13Q8NBN7 331 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 LNX1Q8TBB1 728 aaPredicted RBP18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SMARCE1Q969G3 411 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SUSD3Q96L08 255 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 FBXL18Q96ME1 805 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 PDE11AQ9HCR9 933 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 MAN1C1Q9NR34 630 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 VWA8A3KMH1 1905 aa18.1■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 PPEF2O14830 753 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 UBE2HP62256 183 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SURF1Q15526 300 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 VARS2Q5ST30 1063 aaKnown RBP18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SYCE2Q6PIF2 218 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 DSTYKQ6XUX3 929 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 C12orf56Q8IXR9 622 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 APPL2Q8NEU8 664 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 CACTINQ8WUQ7 758 aaKnown RBP18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 UHRF1Q96T88 793 aaPredicted RBP18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 SFXN1Q9H9B4 322 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 MTRRQ9UBK8 725 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 DPP7Q9UHL4 492 aa18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 USP15Q9Y4E8 981 aaPredicted RBP18.09■□□□□ 0.49
TVP23C-CDRT4-204ENST00000557349 H7C4K7 107 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PDXKO00764 312 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 CALUO43852 315 aaPredicted RBP18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 RARS2Q5T160 578 aaKnown RBP18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 LMBRD2Q68DH5 695 aaPredicted RBP18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ZNF280DQ6N043 979 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 CES5AQ6NT32 575 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 GUF1Q8N442 669 aaKnown RBP18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ERCC4Q92889 916 aaPredicted RBP18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ZNF560Q96MR9 790 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 GSDMAQ96QA5 445 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 FNBP1Q96RU3 617 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 COL25A1Q9BXS0 654 aaPredicted RBP18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 KCTD10Q9H3F6 313 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 TSHZ2Q9NRE2 1034 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PCDHB8Q9UN66 801 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 CDY1Q9Y6F8 540 aa18.08■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PLXNA3P51805 1871 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ANO9A1A5B4 782 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 TGM5O43548 720 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 NR3C1P04150 777 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ITGB3P05106 788 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 SPATA31D3P0C874 917 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 DLATP10515 647 aaKnown RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ODC1P11926 461 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 POLR2BP30876 1174 aaKnown RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 AARSP49588 968 aaKnown RBP eCLIP18.07■□□□□ 0.489e-7■■■■■ 61.1
TVP23C-CDRT4-204ENST00000557349 TAF6P49848 677 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ITIH3Q06033 890 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 SMAD2Q15796 467 aaKnown RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 SPATA31D4Q6ZUB0 917 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 USP37Q86T82 979 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 SMYD4Q8IYR2 804 aaPredicted RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 C12orf76Q8N812 135 aaPredicted RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 CCDC127Q96BQ5 260 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 NECAB3Q96P71 396 aaPredicted RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 CLSTN3Q9BQT9 956 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PCDHA5Q9Y5H7 936 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 BACE2Q9Y5Z0 518 aa18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 TCF20Q9UGU0 1960 aaKnown RBP18.07■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 ARHGEF37A1IGU5 675 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 M0QZQ0 153 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PIRO00625 290 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 TNNC2P02585 160 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 KRT19P08727 400 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 TNNI1P19237 187 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PAX3P23760 479 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 OR1D2P34982 312 aa18.06■□□□□ 0.48
TVP23C-CDRT4-204ENST00000557349 PNPLA4P41247 253 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms