RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 LPLP06858 475 aa5□□□□□ -1.61
CHD8-212ENST00000557329 CTSSP25774 331 aa5□□□□□ -1.61
CHD8-212ENST00000557329 GDF5P43026 501 aa5□□□□□ -1.61
CHD8-212ENST00000557329 SCAND1P57086 179 aa5□□□□□ -1.61
CHD8-212ENST00000557329 APBA1Q02410 837 aa5□□□□□ -1.61
CHD8-212ENST00000557329 MBNL2Q5VZF2 373 aaKnown RBP5□□□□□ -1.61
CHD8-212ENST00000557329 DRICH1Q6PGQ1 229 aaPredicted RBP5□□□□□ -1.61
CHD8-212ENST00000557329 DDX42Q86XP3 938 aaKnown RBP eCLIP5□□□□□ -1.61
CHD8-212ENST00000557329 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5□□□□□ -1.61
CHD8-212ENST00000557329 ADI1Q9BV57 179 aa5□□□□□ -1.61
CHD8-212ENST00000557329 VPS11Q9H270 941 aa5□□□□□ -1.61
CHD8-212ENST00000557329 BCO1Q9HAY6 547 aa5□□□□□ -1.61
CHD8-212ENST00000557329 DNAJC28Q9NX36 388 aa5□□□□□ -1.61
CHD8-212ENST00000557329 GPRC5DQ9NZD1 345 aa5□□□□□ -1.61
CHD8-212ENST00000557329 DPP7Q9UHL4 492 aa5□□□□□ -1.61
CHD8-212ENST00000557329 MRFAP1Q9Y605 127 aa5□□□□□ -1.61
CHD8-212ENST00000557329 ARHGEF28Q8N1W1 1705 aaKnown RBP5□□□□□ -1.61
CHD8-212ENST00000557329 PRR5-ARHGAP8B1AHC4 643 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 CYR61O00622 381 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 TRIM24O15164 1050 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 PJA2O43164 708 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 MMP10P09238 476 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 VEGFAP15692 232 aaPredicted RBP4.99□□□□□ -1.61
CHD8-212ENST00000557329 DPEP1P16444 411 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 CDK11BP21127 795 aaKnown RBP4.99□□□□□ -1.61
CHD8-212ENST00000557329 ECHS1P30084 290 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 ERVK-21P61565 698 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 MALLQ13021 153 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 ATP2B3Q16720 1220 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 KCNK18Q7Z418 384 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 ARHGEF25Q86VW2 580 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 SLC16A11Q8NCK7 471 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 ATXN2LQ8WWM7 1075 aaKnown RBP4.99□□□□□ -1.61
CHD8-212ENST00000557329 DCLRE1CQ96SD1 692 aaKnown RBP4.99□□□□□ -1.61
CHD8-212ENST00000557329 CPPED1Q9BRF8 314 aaPredicted RBP4.99□□□□□ -1.61
CHD8-212ENST00000557329 GPR87Q9BY21 358 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 MS4A5Q9H3V2 200 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 MOCS1Q9NZB8 636 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 LMO7Q8WWI1 1683 aa4.99□□□□□ -1.61
CHD8-212ENST00000557329 BCL9O00512 1426 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 RPLP2P05387 115 aaKnown RBP4.98□□□□□ -1.61
CHD8-212ENST00000557329 TACR2P21452 398 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 MCM7P33993 719 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 PTGS2P35354 604 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 GPR3P46089 330 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 MTNR1BP49286 362 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 FLT3LGP49771 235 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 SLC16A1P53985 500 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 TGFB2P61812 414 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 PURAQ00577 322 aaKnown RBP4.98□□□□□ -1.61
CHD8-212ENST00000557329 SP140Q13342 867 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 RRP1BQ14684 758 aaKnown RBP4.98□□□□□ -1.61
CHD8-212ENST00000557329 ADRM1Q16186 407 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 MST1LQ2TV78 715 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 CRIP3Q6Q6R5 217 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 OR7D4Q8NG98 312 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 ZFP28Q8NHY6 868 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 ZNF503Q96F45 646 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 SORCS2Q96PQ0 1159 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 MNTQ99583 582 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 MANSC1Q9H8J5 431 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 GPR45Q9Y5Y3 372 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 POLR3AO14802 1390 aaPredicted RBP4.98□□□□□ -1.61
CHD8-212ENST00000557329 NHSQ6T4R5 1651 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 RGPD5Q99666 1765 aa4.98□□□□□ -1.61
CHD8-212ENST00000557329 XDHP47989 1333 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 ITSN1Q15811 1721 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 LCHNA4D1U4 455 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 AKR1B10O60218 316 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 ITGA10O75578 1167 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 SNRPA1P09661 255 aaKnown RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 MAKP20794 623 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 HMGB2P26583 209 aaKnown RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 CASRP41180 1078 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 GUCY2FP51841 1108 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 PER3P56645 1201 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 MXRA7P84157 204 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 CDK17Q00537 523 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 FAM47AQ5JRC9 791 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 TOR2AQ5JU69 321 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 SYDE2Q5VT97 1194 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 SPTY2D1Q68D10 685 aaPredicted RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 ARMC6Q6NXE6 501 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 SPRED1Q7Z699 444 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 CNTD1Q8N815 330 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 CASKIN2Q8WXE0 1202 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 RIN2Q8WYP3 895 aaPredicted RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 FAM193BQ96PV7 902 aaPredicted RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 PLEKHG4BQ96PX9 1271 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 ZNF747Q9BV97 191 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 QRSL1Q9H0R6 528 aaKnown RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 CSRNP2Q9H175 543 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 CCM2LQ9NUG4 571 aaPredicted RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 FAM30AQ9NZY2 134 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 EDARQ9UNE0 448 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 PAPPAQ13219 1627 aa4.97□□□□□ -1.61
CHD8-212ENST00000557329 CPSF1Q10570 1443 aaKnown RBP4.97□□□□□ -1.61
CHD8-212ENST00000557329 PLEKHG2Q9H7P9 1386 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms