RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CALCRLQ16602 461 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 DBN1Q16643 649 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 UVSSAQ2YD98 709 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 CDCA2Q69YH5 1023 aaPredicted RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 ZC3H14Q6PJT7 736 aaKnown RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 PALB2Q86YC2 1186 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 MCPH1Q8NEM0 835 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 ASAP3Q8TDY4 903 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 RIN2Q8WYP3 895 aaPredicted RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 PIK3R5Q8WYR1 880 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 TNFRSF25Q93038 417 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 SHDQ96IW2 340 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 CCDC43Q96MW1 224 aaKnown RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 FZD8Q9H461 694 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 ALG2Q9H553 416 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 TTC12Q9H892 705 aaPredicted RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 ETNK1Q9HBU6 452 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 TIMMDC1Q9NPL8 285 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 ORC3Q9UBD5 711 aaPredicted RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 HES2Q9Y543 173 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 TDRD15B5MCY1 1934 aaKnown RBP9.58□□□□□ -0.88
VRK1-206ENST00000557222 CACNA1IQ9P0X4 2223 aa9.58□□□□□ -0.88
VRK1-206ENST00000557222 N4BP3O15049 544 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 MUTP22033 750 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 RFX1P22670 979 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 AKAP5P24588 427 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 MAGEA9P43362 315 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 ID4P47928 161 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 RBM25P49756 843 aaKnown RBP9.57□□□□□ -0.88
VRK1-206ENST00000557222 STARD6P59095 220 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 EARS2Q5JPH6 523 aaKnown RBP9.57□□□□□ -0.88
VRK1-206ENST00000557222 RSPO2Q6UXX9 243 aaPredicted RBP9.57□□□□□ -0.88
VRK1-206ENST00000557222 MTSS1LQ765P7 747 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 ZBTB8OSQ8IWT0 167 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 RSAD2Q8WXG1 361 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 MTMR9Q96QG7 549 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 TTPALQ9BTX7 342 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 OSBPL6Q9BZF3 934 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 C2orf40Q9H1Z8 148 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 NXF3Q9H4D5 531 aaKnown RBP9.57□□□□□ -0.88
VRK1-206ENST00000557222 TBC1D17Q9HA65 648 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 TUFT1Q9NNX1 390 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 ARHGEF3Q9NR81 526 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 DLGAP2Q9P1A6 1054 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 PARP2Q9UGN5 583 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 FBXW11Q9UKB1 542 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 TPCN1Q9ULQ1 816 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 SIT1Q9Y3P8 196 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 GPR179Q6PRD1 2367 aa9.57□□□□□ -0.88
VRK1-206ENST00000557222 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 F8W810 466 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 TMEM189-UBE2V1I3L0A0 370 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 NEMFO60524 1076 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 XYLBO75191 536 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 CTDNEP1O95476 244 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 NPTXRO95502 500 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 THP07101 528 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 SPATA31D3P0C874 917 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 PRKCQQ04759 706 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 ORC2Q13416 577 aaPredicted RBP9.56□□□□□ -0.88
VRK1-206ENST00000557222 GAS6Q14393 721 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 ZNF528Q3MIS6 628 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 LIN9Q5TKA1 542 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 DCLRE1AQ6PJP8 1040 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 SPATA31D4Q6ZUB0 917 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 C1orf210Q8IVY1 113 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 LNX1Q8TBB1 728 aaPredicted RBP9.56□□□□□ -0.88
VRK1-206ENST00000557222 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 NACC1Q96RE7 527 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 CLSTN3Q9BQT9 956 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 POLR3CQ9BUI4 534 aaPredicted RBP9.56□□□□□ -0.88
VRK1-206ENST00000557222 APOL6Q9BWW8 343 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 POLR3FQ9H1D9 316 aaPredicted RBP9.56□□□□□ -0.88
VRK1-206ENST00000557222 CDH7Q9ULB5 785 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 KCNH3Q9ULD8 1083 aa9.56□□□□□ -0.88
VRK1-206ENST00000557222 LRRIQ4A6NIV6 560 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 ACKR2O00590 384 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 B4GALT5O43286 388 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 SPATA31C1P0DKV0 1188 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 FDPSP14324 419 aaKnown RBP9.55□□□□□ -0.88
VRK1-206ENST00000557222 TXKP42681 527 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 PFKPQ01813 784 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 RAB33AQ14088 237 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 PPP2R5AQ15172 486 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 PSMD5Q16401 504 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 MAPK6Q16659 721 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 DCAF4L1Q3SXM0 396 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 RTP2Q5QGT7 225 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 PPM1LQ5SGD2 360 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 FAM171A1Q5VUB5 890 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.55□□□□□ -0.88
VRK1-206ENST00000557222 GET4Q7L5D6 327 aaPredicted RBP9.55□□□□□ -0.88
VRK1-206ENST00000557222 APBB1IPQ7Z5R6 666 aaPredicted RBP9.55□□□□□ -0.88
VRK1-206ENST00000557222 PJA1Q8NG27 643 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 PIGOQ8TEQ8 1089 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 ADPGKQ9BRR6 497 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 DDX23Q9BUQ8 820 aaKnown RBP9.55□□□□□ -0.88
VRK1-206ENST00000557222 GJB4Q9NTQ9 266 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms