RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 MX1P20591 662 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 TACR2P21452 398 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 FKBP1BP68106 108 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 MAP2K1Q02750 393 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-243ENST00000556671 HDAC1Q13547 482 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-243ENST00000556671 CRIP3Q6Q6R5 217 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ADGRA1Q86SQ6 560 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 FAM83AQ86UY5 434 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 OSTM1Q86WC4 334 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 PTRH1Q86Y79 214 aaKnown RBP5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ANKRD13AQ8IZ07 590 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 Q8N1X5 172 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ZKSCAN4Q969J2 545 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-243ENST00000556671 LRRC37BQ96QE4 947 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 FSD1Q9BTV5 496 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 DHRS4Q9BTZ2 278 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ZNF341Q9BYN7 854 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ARMT1Q9H993 441 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 ARHGAP28Q9P2N2 729 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 SRRDQ9UH36 339 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 PHIPQ8WWQ0 1821 aa5.57□□□□□ -1.52
ATXN3-243ENST00000556671 PTPRFP10586 1907 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 PDS5AQ29RF7 1337 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 ESYT3A0FGR9 886 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 DDTLA6NHG4 134 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 GSTA4O15217 222 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 FOXS1O43638 330 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 CLASP2O75122 1294 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 ENTPD3O75355 529 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 C4BPAP04003 597 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 SRGAP2CP0DJJ0 459 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 HSPA1AP0DMV8 641 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 HSPA1BP0DMV9 641 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 PTGS1P23219 599 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 MAP2K2P36507 400 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 JAM2P57087 298 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 NOGQ13253 232 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 SERINC3Q13530 473 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 CRY1Q16526 586 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 FKBP1CQ5VVH2 108 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 CHD1LQ86WJ1 897 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 ZNF384Q8TF68 577 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 NEIL1Q96FI4 390 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 CCDC136Q96JN2 1154 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 ZNF747Q9BV97 191 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 SMURF1Q9HCE7 757 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 DDX4Q9NQI0 724 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 MCM9Q9NXL9 1143 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 MRPS23Q9Y3D9 190 aaKnown RBP5.56□□□□□ -1.52
ATXN3-243ENST00000556671 PCDHA9Q9Y5H5 950 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 SLC4A4Q9Y6R1 1079 aa5.56□□□□□ -1.52
ATXN3-243ENST00000556671 LAMB1P07942 1786 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 GAKO14976 1311 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 CCDC66A2RUB6 948 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 MPHOSPH10O00566 681 aaKnown RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 RNF113AO15541 343 aaKnown RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 PRKAB2O43741 272 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 WDHD1O75717 1129 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 GLRX3O76003 335 aaKnown RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 MBD4O95243 580 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 CRTAMO95727 393 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 HLA-DOAP06340 250 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 KRT15P19012 456 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 AOAHP28039 575 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 ETV4P43268 484 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 LBX1P52954 281 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 PDE1AP54750 535 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 RHBDL3P58872 404 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 HERVK_113P62684 666 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 IL13RA1P78552 427 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 LACTBP83111 547 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 ZNF568Q3ZCX4 644 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 FAM47CQ5HY64 1035 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 SPDYAQ5MJ70 313 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 GADL1Q6ZQY3 521 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 EP400NLQ6ZTU2 488 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 CXXC5Q7LFL8 322 aaKnown RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 TAX1BP1Q86VP1 789 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 RASAL3Q86YV0 1011 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 SDR42E1Q8WUS8 393 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 ARMC5Q96C12 935 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 OPTNQ96CV9 577 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 WNK4Q96J92 1243 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 IDI2Q9BXS1 227 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 VPS11Q9H270 941 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 INCENPQ9NQS7 918 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 BTBD7Q9P203 1132 aa5.55□□□□□ -1.52
ATXN3-243ENST00000556671 ZFR2Q9UPR6 939 aaKnown RBP5.55□□□□□ -1.52
ATXN3-243ENST00000556671 TTC41PQ6P2S7 1318 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 SIPA1L1O43166 1804 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 PRAMEF25A6NGN4 478 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 FOXN1O15353 648 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 ADD2P35612 726 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 CTCFP49711 727 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-243ENST00000556671 RAC3P60763 192 aa5.54□□□□□ -1.52
ATXN3-243ENST00000556671 NUCB1Q02818 461 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms