RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 CYTH3O43739 400 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 GAS2O43903 313 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 TLR2O60603 784 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 COQ9O75208 318 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 EPN2O95208 641 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CRTAMO95727 393 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PNPP00491 289 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TNNC2P02585 160 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ASLP04424 464 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PGRP06401 933 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MYBL1P10243 752 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RARAP10276 462 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CYP7A1P22680 504 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 STIP1P31948 543 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 TMED10P49755 219 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 BCAP31P51572 246 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TNNC1P63316 161 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 IRX5P78411 483 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 CDK17Q00537 523 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CKAP4Q07065 602 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 ABRQ12979 859 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CAMK2GQ13555 558 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 DHX34Q14147 1143 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 KCNB1Q14721 858 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TMEM132BQ14DG7 1078 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 UGT8Q16880 541 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DOK7Q18PE1 504 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PABPC1LQ4VXU2 614 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 IGSF11Q5DX21 431 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FAM209BQ5JX69 171 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KANK4Q5T7N3 995 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 KIAA0319Q5VV43 1072 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SCARA3Q6AZY7 606 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 C8orf74Q6P047 294 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 IYDQ6PHW0 289 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ZNF783Q6ZMS7 281 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TRIM72Q6ZMU5 477 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 HEATR3Q7Z4Q2 680 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TADA2BQ86TJ2 420 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ATCAYQ86WG3 371 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PHC2Q8IXK0 858 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DIS3L2Q8IYB7 885 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 CLYBLQ8N0X4 340 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 AGGF1Q8N302 714 aaeCLIP1.94□□□□□ -2.1
KTN1-224ENST00000556631 SLC4A11Q8NBS3 891 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 BBS1Q8NFJ9 593 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DEPDC1BQ8WUY9 529 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ARL5BQ96KC2 179 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 NSMCE2Q96MF7 247 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RIPOR3Q96MK2 946 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DCLRE1CQ96SD1 692 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 CD180Q99467 661 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 NOC4LQ9BVI4 516 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 DPCDQ9BVM2 203 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 SARGQ9BW04 601 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MXD3Q9BW11 206 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TMEM120AQ9BXJ8 343 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CARD11Q9BXL7 1154 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 USP26Q9BXU7 913 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 REXO4Q9GZR2 422 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 LMAN2LQ9H0V9 348 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TMEM245Q9H330 911 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TOR3AQ9H497 397 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 STN1Q9H668 368 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 ELP3Q9H9T3 547 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ABCB10Q9NRK6 738 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SEMA3GQ9NS98 782 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TRMT13Q9NUP7 481 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 CLIC5Q9NZA1 410 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 HDAC6Q9UBN7 1215 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SUCOQ9UBS9 1254 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 SF3B6Q9Y3B4 125 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 SH3BP1Q9Y3L3 701 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 LOC100509620A0A075B734 347 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DENND3A2RUS2 1198 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SH2D7A6NKC9 451 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 LRRC53A6NM62 1247 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 A8MUA0 341 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 H3BMM5 538 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 H3BQ06 376 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 NDUFS8O00217 210 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FCHO1O14526 889 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MEFVO15553 781 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 ZNF862O60290 1169 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 VAMP4O75379 141 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DGKIO75912 1065 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 GJB6O95452 261 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ASS1P00966 412 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 MT-ND3P03897 115 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 XRCC6P12956 609 aaKnown RBP eCLIP1.94□□□□□ -2.1
KTN1-224ENST00000556631 NCAM1P13591 858 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TRIM27P14373 513 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PECAM1P16284 738 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 CALB2P22676 271 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PRKAR1BP31321 381 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 STX2P32856 288 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KRT2P35908 639 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 THPOP40225 353 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MAGEA1P43355 309 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MMP14P50281 582 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms