RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-212ENST00000556541 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-212ENST00000556541 DLL1O00548 723 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 DDHD2O94830 711 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 EFEMP2O95967 443 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 LINC00271P0C7V0 271 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 PPM1AP35813 382 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 MRE11P49959 708 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 AFF1P51825 1210 aaKnown RBP12.13□□□□□ -0.47
FOXN3-212ENST00000556541 RNASELQ05823 741 aaKnown RBP12.13□□□□□ -0.47
FOXN3-212ENST00000556541 ELAVL2Q12926 359 aaKnown RBP12.13□□□□□ -0.47
FOXN3-212ENST00000556541 MYO1EQ12965 1108 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 BIRC3Q13489 604 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 TRPC3Q13507 836 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 GSE1Q14687 1217 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 RAB30Q15771 203 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 EXOC3L4Q17RC7 722 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 SV2CQ496J9 727 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 GLRA4Q5JXX5 417 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 ENOSF1Q7L5Y1 443 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 TTC39CQ8N584 583 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 CCDC150Q8NCX0 1101 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 C18orf25Q96B23 403 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-212ENST00000556541 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-212ENST00000556541 PLVAPQ9BX97 442 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 EDEM3Q9BZQ6 932 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 IMPG2Q9BZV3 1241 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 VPS16Q9H269 839 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 TUBGCP4Q9UGJ1 667 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 INPP5FQ9Y2H2 1132 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 SIK3Q9Y2K2 1263 aa12.13□□□□□ -0.47
FOXN3-212ENST00000556541 C5orf67F2Z3F1 127 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 PODXLO00592 558 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 TLL1O43897 1013 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 PHACTR2O75167 634 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 UPP2O95045 317 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 POMCP01189 267 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 ALDH2P05091 517 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 ITGB3P05106 788 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 GALTP07902 379 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 CDC25BP30305 580 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
FOXN3-212ENST00000556541 PIK3CAP42336 1068 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 TAF6P49848 677 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 LILRA4P59901 499 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 GCNT1Q02742 428 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 UBXN1Q04323 297 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
FOXN3-212ENST00000556541 DPY19L2P1Q6NXN4 242 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 FIBCD1Q8N539 461 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 TAS1R2Q8TE23 839 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 NUP58Q9BVL2 599 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 COLEC11Q9BWP8 271 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
FOXN3-212ENST00000556541 R3HCC1Q9Y3T6 440 aaKnown RBP12.12□□□□□ -0.47
FOXN3-212ENST00000556541 M0QZQ0 153 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 TRAPPC3O43617 180 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 CST3P01034 146 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 CYP11A1P05108 521 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 RB1P06400 928 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 P4HA1P13674 534 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 TBXAS1P24557 533 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 PON1P27169 355 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 GATMP50440 423 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 CLCNKBP51801 687 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 KCNMA1Q12791 1236 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 TRIM14Q14142 442 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 LMBRD2Q68DH5 695 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 CD300LGQ6UXG3 332 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 CREBRFQ8IUR6 639 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 FMNL3Q8IVF7 1028 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 RNF168Q8IYW5 571 aaPredicted RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 SEMA4DQ92854 862 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 HPDLQ96IR7 371 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 SUSD3Q96L08 255 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 ZNF558Q96NG5 402 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 NT5C1BQ96P26 610 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 ZBED2Q9BTP6 218 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 XPO4Q9C0E2 1151 aaKnown RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 INTS2Q9H0H0 1204 aaKnown RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 CYP3A43Q9HB55 503 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 APEX2Q9UBZ4 518 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 MYO6Q9UM54 1294 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms