RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ANO9A1A5B4 782 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 LINC01553A4QN01 128 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 LRRC10BA6NIK2 292 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 PODXLO00592 558 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 NRP1O14786 923 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 CA3P07451 260 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 GALTP07902 379 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 POLR2BP30876 1174 aaKnown RBP18.78■□□□□ 0.6
TUBB3-211ENST00000556536 MXI1P50539 228 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 UPP1Q16831 310 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 SPOUT1Q5T280 376 aaKnown RBP18.78■□□□□ 0.6
TUBB3-211ENST00000556536 KRT39Q6A163 491 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 SPRED2Q7Z698 418 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 C3orf58Q8NDZ4 430 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 TAS1R2Q8TE23 839 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 TMEM175Q9BSA9 504 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 NDST4Q9H3R1 872 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 ITGA11Q9UKX5 1188 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 AGAP1Q9UPQ3 857 aa18.78■□□□□ 0.6
TUBB3-211ENST00000556536 PRG3Q9Y2Y8 225 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-211ENST00000556536 NT5C1B-RDH14C9J2C7 533 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 PIRO00625 290 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 PHACTR2O75167 634 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 LRRN2O75325 713 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 HLA-DRAP01903 254 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 KRT19P08727 400 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 RPL9P32969 192 aaKnown RBP18.77■□□□□ 0.6
TUBB3-211ENST00000556536 MYL7Q01449 175 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 CD300LGQ6UXG3 332 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 COLGALT1Q8NBJ5 622 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 ANKRD20A12PQ8NF67 263 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 BCL7CQ8WUZ0 217 aaPredicted RBP18.77■□□□□ 0.6
TUBB3-211ENST00000556536 SEMA4DQ92854 862 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 CLP1Q92989 425 aaKnown RBP18.77■□□□□ 0.6
TUBB3-211ENST00000556536 ELMO3Q96BJ8 720 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 UROC1Q96N76 676 aa18.77■□□□□ 0.6
TUBB3-211ENST00000556536 ANK1P16157 1881 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 FNDC1Q4ZHG4 1894 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-211ENST00000556536 PES1O00541 588 aaKnown RBP18.76■□□□□ 0.59
TUBB3-211ENST00000556536 KIF4AO95239 1232 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 ALDH2P05091 517 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 ITGB1P05556 798 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 LAG3P18627 525 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 MYL6P60660 151 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 RBP5P82980 135 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 FANCCQ00597 558 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 NCOA4Q13772 614 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 TJAP1Q5JTD0 557 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 KCNT2Q6UVM3 1135 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 TMEM173Q86WV6 379 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-211ENST00000556536 DDX27Q96GQ7 796 aaKnown RBP18.76■□□□□ 0.59
TUBB3-211ENST00000556536 ZNF558Q96NG5 402 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-211ENST00000556536 NKX2-4Q9H2Z4 354 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 MARCH5Q9NX47 278 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 FAN1Q9Y2M0 1017 aa18.76■□□□□ 0.59
TUBB3-211ENST00000556536 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-211ENST00000556536 SPTLC1O15269 473 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 PMM2O15305 246 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 PIK3CAP42336 1068 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 ALDH7A1P49419 539 aaKnown RBP18.75■□□□□ 0.59
TUBB3-211ENST00000556536 TRPC3Q13507 836 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 RAB30Q15771 203 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 DCLRE1AQ6PJP8 1040 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 HASPINQ8TF76 798 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 C17orf80Q9BSJ5 609 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 PI4K2AQ9BTU6 479 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 XYLT2Q9H1B5 865 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.75■□□□□ 0.59
TUBB3-211ENST00000556536 MSRAQ9UJ68 235 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 COQ4Q9Y3A0 265 aa18.75■□□□□ 0.59
TUBB3-211ENST00000556536 CITO14578 2027 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 LGALS16A8MUM7 142 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 P4HA2O15460 535 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 AP5Z1O43299 807 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 N4BP1O75113 896 aaKnown RBP18.74■□□□□ 0.59
TUBB3-211ENST00000556536 B3GAT3O94766 335 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 SERPINC1P01008 464 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 TPM2P07951 284 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 TAP1Q03518 808 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 SLC39A11Q8N1S5 342 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 LRRC52Q8N7C0 313 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 FBXL13Q8NEE6 735 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 HPDLQ96IR7 371 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 CRACR2AQ9BSW2 395 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 COLEC11Q9BWP8 271 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
TUBB3-211ENST00000556536 TMEM189-UBE2V1I3L0A0 370 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 TNFRSF10AO00220 468 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 TEX33O43247 280 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 DNAJB2P25686 324 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 CTNNB1P35222 781 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 BMPR1AP36894 532 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 BRCC3P46736 316 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 LILRA4P59901 499 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 SPOPLQ6IQ16 392 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 LMO3Q8TAP4 145 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 IGSF21Q96ID5 467 aa18.73■□□□□ 0.59
TUBB3-211ENST00000556536 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms