RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GLRX3O76003 335 aaKnown RBP5.92□□□□□ -1.46
SRP54-211ENST00000556445 ANXA1P04083 346 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 ASLP04424 464 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 ADRB1P08588 477 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 ZNF888P0CJ79 500 aaPredicted RBP5.92□□□□□ -1.46
SRP54-211ENST00000556445 SDSP20132 328 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 RRM1P23921 792 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 IGFALSP35858 605 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 TERF1P54274 439 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 IRF9Q00978 393 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 STRN3Q13033 797 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 GCKRQ14397 625 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 GBX1Q14549 363 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 STAT4Q14765 748 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 SAFBQ15424 915 aaKnown RBP eCLIP5.92□□□□□ -1.46
SRP54-211ENST00000556445 ZNF827Q17R98 1081 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 PROSER3Q2NL68 480 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 COBLL1Q53SF7 1204 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 HSP90AB3PQ58FF7 597 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 C1QTNF12Q5T7M4 302 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 CNNM4Q6P4Q7 775 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 LVRNQ6Q4G3 990 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 CXXC5Q7LFL8 322 aaKnown RBP5.92□□□□□ -1.46
SRP54-211ENST00000556445 DDX53Q86TM3 631 aaKnown RBP5.92□□□□□ -1.46
SRP54-211ENST00000556445 HSCBQ8IWL3 235 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 TTC9BQ8N6N2 239 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 CCDC191Q8NCU4 936 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 SNX21Q969T3 373 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 WNK4Q96J92 1243 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 MYD88Q99836 296 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 BTBD2Q9BX70 525 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 UCKL1Q9NWZ5 548 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 SMPD4Q9NXE4 827 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 SAMD15Q9P1V8 674 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 CTDP1Q9Y5B0 961 aaPredicted RBP5.92□□□□□ -1.46
SRP54-211ENST00000556445 WNK3Q9BYP7 1800 aa5.92□□□□□ -1.46
SRP54-211ENST00000556445 ARFGEF2Q9Y6D5 1785 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 KAT6BQ8WYB5 2073 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 KCPQ6ZWJ8 1503 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 ITGB4P16144 1822 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 AFDNP55196 1824 aaKnown RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 PRAMEF22A3QJZ6 481 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 HIP1O00291 1037 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 GPR42O15529 346 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 IGKV5-2P06315 115 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 RBP3P10745 1247 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 GSPT1P15170 499 aaKnown RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 DDIT3P35638 169 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 ECE1P42892 770 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 ETV4P43268 484 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 CHAF1AQ13111 956 aaPredicted RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 USP10Q14694 798 aaKnown RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 DDB1Q16531 1140 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 WDR72Q3MJ13 1102 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 MINDY4Q4G0A6 757 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 DACT2Q5SW24 774 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 SYDE2Q5VT97 1194 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 KANK2Q63ZY3 851 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 GLB1LQ6UWU2 654 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 KIF6Q6ZMV9 814 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 SPATS2Q86XZ4 545 aaKnown RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 TPH2Q8IWU9 490 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 CNTROBQ8N137 903 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 PPM1KQ8N3J5 372 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 LEO1Q8WVC0 666 aaPredicted RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 RUFY2Q8WXA3 655 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 SECISBP2LQ93073 1101 aaKnown RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 GBP4Q96PP9 640 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 SERINC2Q96SA4 455 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 BOCQ9BWV1 1114 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 ZDHHC5Q9C0B5 715 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 CSRNP2Q9H175 543 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 CWC25Q9NXE8 425 aaPredicted RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 IP6K2Q9UHH9 426 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 EVLQ9UI08 416 aaPredicted RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 HDAC9Q9UKV0 1011 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 ASB1Q9Y576 335 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 MORC2Q9Y6X9 1032 aaPredicted RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 SPATA31A1Q5TZJ5 1347 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 SALL3Q9BXA9 1300 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 USP42Q9H9J4 1324 aaKnown RBP5.91□□□□□ -1.46
SRP54-211ENST00000556445 JCADQ9P266 1359 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 BCL9O00512 1426 aa5.91□□□□□ -1.46
SRP54-211ENST00000556445 GLI3P10071 1580 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 NPEPPSL1A6NEC2 478 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 TRAF5O00463 557 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 DVL2O14641 736 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 OPA1O60313 960 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 RENBPP51606 427 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 ADAM17P78536 824 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 STK3Q13188 491 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 TMEM132BQ14DG7 1078 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 RABEP1Q15276 862 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 TOMM20Q15388 145 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 DHCR24Q15392 516 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 ARHGAP44Q17R89 818 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 RABL6Q3YEC7 729 aaPredicted RBP5.9□□□□□ -1.46
SRP54-211ENST00000556445 SLFN13Q68D06 897 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 PPP4R3AQ6IN85 833 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 MZT2AQ6P582 158 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms