RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TRPC3Q13507 836 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 FBXO38Q6PIJ6 1188 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 TMEM192Q8IY95 271 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 UBR7Q8N806 425 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 MSANTD4Q8NCY6 345 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 CAGE1Q8TC20 777 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 UBE2Q2Q8WVN8 375 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 TAF4BQ92750 862 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 ARHGEF26Q96DR7 871 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 ZNF333Q96JL9 665 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.11
VPS33B-205ENST00000556096 LACTBL1A8MY62 500 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 PDE2AO00408 941 aaPredicted RBP15.76■□□□□ 0.11
VPS33B-205ENST00000556096 SEPT4O43236 478 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 HOXC8P31273 242 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 GJA9P57773 515 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 MYL6P60660 151 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 PURAQ00577 322 aaKnown RBP15.76■□□□□ 0.11
VPS33B-205ENST00000556096 BEX3Q00994 111 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 RPS6KA1Q15418 735 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 CLEC16AQ2KHT3 1053 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 KIZQ2M2Z5 673 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 MAP3K21Q5TCX8 1036 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 ACAD10Q6JQN1 1059 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 APBB1IPQ7Z5R6 666 aaPredicted RBP15.76■□□□□ 0.11
VPS33B-205ENST00000556096 ABCB6Q9NP58 842 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 OSGEPQ9NPF4 335 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 ARGLU1Q9NWB6 273 aaPredicted RBP15.76■□□□□ 0.11
VPS33B-205ENST00000556096 STXBP5LQ9Y2K9 1186 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 PCDHB4Q9Y5E5 795 aa15.76■□□□□ 0.11
VPS33B-205ENST00000556096 ANK1P16157 1881 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 MTA2O94776 668 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 KIF4AO95239 1232 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 TUBBP07437 444 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 GNAT1P11488 350 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 PAFAH1B1P43034 410 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 NKX3-2P78367 333 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 HIC1Q14526 733 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 DCAF4L1Q3SXM0 396 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 NT5DC4Q86YG4 428 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 CD302Q8IX05 232 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 ARMC5Q96C12 935 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 PARD6BQ9BYG5 372 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 NIF3L1Q9GZT8 377 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.75■□□□□ 0.11
VPS33B-205ENST00000556096 FAM49AQ9H0Q0 323 aaPredicted RBP15.75■□□□□ 0.11
VPS33B-205ENST00000556096 RNF208Q9H0X6 261 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 XYLT2Q9H1B5 865 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 UMODL1Q5DID0 1318 aa15.75■□□□□ 0.11
VPS33B-205ENST00000556096 C17orf102A2RUQ5 167 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 MYADML2A6NDP7 307 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 MEFVO15553 781 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 BUB1BO60566 1050 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 CYP1A2P05177 515 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 UNGP13051 313 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 DARSP14868 501 aaKnown RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 CXCR5P32302 372 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 GRM5P41594 1212 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 ZNF132P52740 706 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 SLC10A6Q3KNW5 377 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 CFAP221Q4G0U5 840 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 CCDC181Q5TID7 509 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 SCARA3Q6AZY7 606 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 TRIM72Q6ZMU5 477 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 RUFY4Q6ZNE9 571 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 PEX26Q7Z412 305 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 DAAM2Q86T65 1068 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 NT5DC3Q86UY8 548 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 NME8Q8N427 588 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 NOA1Q8NC60 698 aaKnown RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 RBBP8NLQ8NC74 664 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 PBKQ96KB5 322 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 ACAP3Q96P50 834 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 UPF3AQ9H1J1 476 aaKnown RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 ANKZF1Q9H8Y5 726 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 HMX1Q9NP08 348 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 GTF3C4Q9UKN8 822 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 CYP1A1P04798 512 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 AXLP30530 894 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 HOXA11P31270 313 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-205ENST00000556096 ZNF699Q32M78 642 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 JADE1Q6IE81 842 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 PPP1R2P3Q6NXS1 205 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 TMEM270Q6UE05 265 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 MMGT1Q8N4V1 131 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 DEFB118Q96PH6 123 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 EPC1Q9H2F5 836 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 AMFRQ9UKV5 643 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 RAB21Q9UL25 225 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 COG5Q9UP83 839 aa15.74■□□□□ 0.11
VPS33B-205ENST00000556096 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 TREHO43280 583 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 PGK1P00558 417 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 NFICP08651 508 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 C6orf222P0C671 652 aaPredicted RBP15.73■□□□□ 0.11
VPS33B-205ENST00000556096 RARBP10826 455 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 EIF4BP23588 611 aaKnown RBP15.73■□□□□ 0.11
VPS33B-205ENST00000556096 ATICP31939 592 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 YWHAEP62258 255 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms