RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 FNIP2Q9P278 1114 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 GMPR2Q9P2T1 348 aaKnown RBP7.35□□□□□ -1.23
PSEN1-216ENST00000556066 FBXL21Q9UKT6 434 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 POLIQ9UNA4 740 aa7.35□□□□□ -1.23
PSEN1-216ENST00000556066 VWA3AA6NCI4 1184 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 H0Y858 1186 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 I3L4J1 428 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 SLC16A4O15374 487 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 N4BP1O75113 896 aaKnown RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 B3GAT3O94766 335 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 AVPP01185 164 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 HARSP12081 509 aaKnown RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 GJB2P29033 226 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 PRPHP41219 470 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 YARSP54577 528 aaKnown RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 ELAVL2Q12926 359 aaKnown RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 TDGQ13569 410 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 NAB2Q15742 525 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 RILPL1Q5EBL4 403 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 LIN9Q5TKA1 542 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 RINT1Q6NUQ1 792 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 GET4Q7L5D6 327 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 KCNK18Q7Z418 384 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 CEP120Q8N960 986 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 ST13P5Q8NFI4 369 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 HDAC7Q8WUI4 952 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 RSAD2Q8WXG1 361 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 PIK3R5Q8WYR1 880 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 ATOH1Q92858 354 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 ZNF707Q96C28 371 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 CDK5RAP3Q96JB5 506 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 TMX3Q96JJ7 454 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 DRC1Q96MC2 740 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 MYADMQ96S97 322 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 CCDC94Q9BW85 323 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 TARS2Q9BW92 718 aaKnown RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 MRPL4Q9BYD3 311 aaKnown RBP7.34□□□□□ -1.23
PSEN1-216ENST00000556066 NT5C3AQ9H0P0 336 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 GOLGA2P5Q9HBQ8 144 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 PRM3Q9NNZ6 103 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 IGSF9Q9P2J2 1179 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 TNFSF13BQ9Y275 285 aa7.34□□□□□ -1.23
PSEN1-216ENST00000556066 PHLPP2Q6ZVD8 1323 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 ANK1P16157 1881 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 TTC24A2A3L6 582 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 CCL16O15467 120 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 ADAM12O43184 909 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 NARSO43776 548 aaKnown RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 C8AP07357 584 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 RFX1P22670 979 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 FSHRP23945 695 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 IGFBP6P24592 240 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 OR1D2P34982 312 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 MATR3P43243 847 aaKnown RBP eCLIP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 CLCNKBP51801 687 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 ATP2C1P98194 919 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 FOXK2Q01167 660 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 STRN3Q13033 797 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 MAPK7Q13164 816 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 PPM1LQ5SGD2 360 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 PDXDC1Q6P996 788 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 LILRA6Q6PI73 481 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 DCLRE1AQ6PJP8 1040 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 CYP26C1Q6V0L0 522 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 C1orf186Q6ZWK4 172 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 GRASPQ7Z6J2 395 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 GPR65Q8IYL9 337 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 DAW1Q8N136 415 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 SIX5Q8N196 739 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 TMEM105Q8N8V8 129 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 LNX1Q8TBB1 728 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 CCDC97Q96F63 343 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 PPP1R10Q96QC0 940 aaKnown RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 ACO2Q99798 780 aaKnown RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 CLSTN3Q9BQT9 956 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 MMTAG2Q9BU76 263 aaKnown RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 CDT1Q9H211 546 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 GDPD2Q9HCC8 539 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 TOPORSQ9NS56 1045 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 ZDHHC7Q9NXF8 308 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 ANKFY1Q9P2R3 1169 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 DUSP12Q9UNI6 340 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 SMC3Q9UQE7 1217 aa7.33□□□□□ -1.24
PSEN1-216ENST00000556066 KMT2BQ9UMN6 2715 aaPredicted RBP7.33□□□□□ -1.24
PSEN1-216ENST00000556066 NOTCH4Q99466 2003 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 DMXL1Q9Y485 3027 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 NPHP3-ACAD11A0A0J9YXS1 232 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 SMIM28A0A1B0GU29 152 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 PROB1E7EW31 1015 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 ZBTB24O43167 697 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 TRAPPC3O43617 180 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 C1RP00736 705 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 F12P00748 615 aaPredicted RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 LAMP2P13473 410 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 FGFR3P22607 806 aa7.32□□□□□ -1.24
PSEN1-216ENST00000556066 TKTP29401 623 aaKnown RBP7.32□□□□□ -1.24
PSEN1-216ENST00000556066 GRM5P41594 1212 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms