RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 RAP1GDS1P52306 607 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 SIK1P57059 783 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 RASA3Q14644 834 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 COG2Q14746 738 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 CNPY1Q3B7I2 92 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 WDR72Q3MJ13 1102 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 PABPC1LQ4VXU2 614 aaKnown RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 ZC2HC1CQ53FD0 456 aaPredicted RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 CYP4F22Q6NT55 531 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 LCA5Q86VQ0 697 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 CPNE8Q86YQ8 564 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHD8-209ENST00000555935 LENG9Q96B70 501 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 IWS1Q96ST2 819 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 EIF2AK1Q9BQI3 630 aaKnown RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 OSBPL8Q9BZF1 889 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 NYXQ9GZU5 481 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 TUFT1Q9NNX1 390 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 KRT82Q9NSB4 513 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 ARL8BQ9NVJ2 186 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 PSMC3IPQ9P2W1 217 aaPredicted RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 FETUBQ9UGM5 382 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 CHORDC1Q9UHD1 332 aaPredicted RBP8.24□□□□□ -1.09
CHD8-209ENST00000555935 VAV3Q9UKW4 847 aa8.24□□□□□ -1.09
CHD8-209ENST00000555935 ATRNL1Q5VV63 1379 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 FAM170AA1A519 330 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SFI1A8K8P3 1242 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 PMM2O15305 246 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 TM9SF1O15321 606 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 MAGEC1O60732 1142 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 TGDSO95455 350 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 FOSP01100 380 aaPredicted RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 VPS41P49754 854 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 CDK7P50613 346 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 FMO1Q01740 532 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 CYP4A11Q02928 519 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 LIN52Q52LA3 116 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 LVRNQ6Q4G3 990 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 FAM178BQ8IXR5 827 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SCYL3Q8IZE3 742 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 C4orf33Q8N1A6 199 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.23□□□□□ -1.09
CHD8-209ENST00000555935 PDCD7Q8N8D1 485 aaKnown RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 TMEM174Q8WUU8 243 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SKA1Q96BD8 255 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 FAM163AQ96GL9 167 aaPredicted RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 FIZ1Q96SL8 496 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 UBE2OQ9C0C9 1292 aaKnown RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 VPS11Q9H270 941 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SAYSD1Q9NPB0 183 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 METTL5Q9NRN9 209 aaKnown RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 KCND2Q9NZV8 630 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 KANSL3Q9P2N6 904 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 ABCA3Q99758 1704 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 ZNF536O15090 1300 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 EMSYQ7Z589 1322 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 CFAP69A5D8W1 941 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 F5H6K3 240 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 POC1B-GALNT4F8VUJ3 575 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 ESRRAP11474 423 aaPredicted RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 IMPDH2P12268 514 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 PLS3P13797 630 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 KLRC2P26717 231 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 MAPK4P31152 587 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 CIITAP33076 1130 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SREBF1P36956 1147 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 VAMP7P51809 220 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 RHBDL3P58872 404 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 CDK16Q00536 496 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 DSG1Q02413 1049 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 GABPAQ06546 454 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 MCL1Q07820 350 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 KLF1Q13351 362 aaPredicted RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 LSAMPQ13449 338 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 ITPK1Q13572 414 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SEPT7Q16181 437 aaKnown RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 GRIK5Q16478 980 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 PLEKHG4Q58EX7 1191 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 C6orf163Q5TEZ5 329 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 ACAD10Q6JQN1 1059 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 PRUNE1Q86TP1 453 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 ST13P4Q8IZP2 240 aaPredicted RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 SLC5A5Q92911 643 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 ALKBH8Q96BT7 664 aaKnown RBP8.23□□□□□ -1.09
CHD8-209ENST00000555935 IKZF4Q9H2S9 585 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 BCAS3Q9H6U6 928 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 LMCD1Q9NZU5 365 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 HEY2Q9UBP5 337 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 TBC1D30Q9Y2I9 924 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 SH3BP1Q9Y3L3 701 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 PCDHA1Q9Y5I3 950 aa8.23□□□□□ -1.09
CHD8-209ENST00000555935 DNALI1O14645 258 aaPredicted RBP8.22□□□□□ -1.09
CHD8-209ENST00000555935 MEIS2O14770 477 aa8.22□□□□□ -1.09
CHD8-209ENST00000555935 RARBP10826 455 aa8.22□□□□□ -1.09
CHD8-209ENST00000555935 AKR1B1P15121 316 aa8.22□□□□□ -1.09
CHD8-209ENST00000555935 ADSSP30520 456 aa8.22□□□□□ -1.09
CHD8-209ENST00000555935 SLC16A2P36021 539 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms