RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 A0A1W2PQD8 194 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 EIF3DO15371 548 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNX6-203ENST00000555416 TBC1D4O60343 1298 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 CYP3A5P20815 502 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 GARTP22102 1010 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 MCM4P33991 863 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 OR1D2P34982 312 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 SYKP43405 635 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 TMEM132DQ14C87 1099 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 POSTNQ15063 836 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 VARS2Q5ST30 1063 aaKnown RBP14.84□□□□□ -0.03
SNX6-203ENST00000555416 GPR149Q86SP6 731 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 KIAA0895Q8NCT3 520 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 KREMEN2Q8NCW0 462 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 SFXN1Q9H9B4 322 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 NUB1Q9Y5A7 615 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 TIMM13Q9Y5L4 95 aaPredicted RBP14.84□□□□□ -0.03
SNX6-203ENST00000555416 CDY1Q9Y6F8 540 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 TRIOO75962 3097 aa14.84□□□□□ -0.03
SNX6-203ENST00000555416 CCDC195A0A1B0GUA6 201 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 ANO9A1A5B4 782 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 TRAPPC3O43617 180 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 EXTL3O43909 919 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 AARSP49588 968 aaKnown RBP eCLIP14.83□□□□□ -0.04
SNX6-203ENST00000555416 STK4Q13043 487 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 RAB33AQ14088 237 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 MRPL58Q14197 206 aaKnown RBP14.83□□□□□ -0.04
SNX6-203ENST00000555416 KMT5BQ4FZB7 885 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 C9orf57Q5W0N0 161 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 CES5AQ6NT32 575 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 ARMCX5Q6P1M9 558 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 RNF135Q8IUD6 432 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 BRSK2Q8IWQ3 736 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 CD302Q8IX05 232 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 NOC3LQ8WTT2 800 aaKnown RBP14.83□□□□□ -0.04
SNX6-203ENST00000555416 PYM1Q9BRP8 204 aaKnown RBP14.83□□□□□ -0.04
SNX6-203ENST00000555416 ASB7Q9H672 318 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 TMEM206Q9H813 350 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 FBXW11Q9UKB1 542 aa14.83□□□□□ -0.04
SNX6-203ENST00000555416 MTCL1Q9Y4B5 1905 aaKnown RBP14.83□□□□□ -0.04
SNX6-203ENST00000555416 SCN1AP35498 2009 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 DOCK6Q96HP0 2047 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 C2CD4DB7Z1M9 353 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 M0QZQ0 153 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 PIRO00625 290 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 CLIC2O15247 247 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 PAPLNO95428 1278 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 CREMQ03060 361 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 KRBA2Q6ZNG9 492 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 ANKS3Q6ZW76 656 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 CBWD2Q8IUF1 395 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 BEST2Q8NFU1 509 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 CMASQ8NFW8 434 aaPredicted RBP14.82□□□□□ -0.04
SNX6-203ENST00000555416 POP1Q99575 1024 aaKnown RBP14.82□□□□□ -0.04
SNX6-203ENST00000555416 PDE11AQ9HCR9 933 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 C11orf16Q9NQ32 467 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 AGPAT3Q9NRZ7 376 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 RBAKQ9NYW8 714 aaPredicted RBP14.82□□□□□ -0.04
SNX6-203ENST00000555416 HSPBP1Q9NZL4 362 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 USP25Q9UHP3 1055 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 MUTYHQ9UIF7 546 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 PCDHB8Q9UN66 801 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 DERAQ9Y315 318 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 C2CD2Q9Y426 696 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 BACE2Q9Y5Z0 518 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 PTPRJQ12913 1337 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 DENND4AQ7Z401 1863 aa14.82□□□□□ -0.04
SNX6-203ENST00000555416 PI4K2BG5E9Z4 385 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 TULP1O00294 542 aaPredicted RBP14.81□□□□□ -0.04
SNX6-203ENST00000555416 SYN3O14994 580 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 N4BP1O75113 896 aaKnown RBP14.81□□□□□ -0.04
SNX6-203ENST00000555416 ZMYND10O75800 440 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 ZNF202O95125 648 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 IL18RAPO95256 599 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 MTHFRP42898 656 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 LILRA4P59901 499 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 POU5F1Q01860 360 aaKnown RBP14.81□□□□□ -0.04
SNX6-203ENST00000555416 ROR1Q01973 937 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 BMT2Q1RMZ1 405 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 ATAT1Q5SQI0 421 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 LMBRD2Q68DH5 695 aaPredicted RBP14.81□□□□□ -0.04
SNX6-203ENST00000555416 SLC8B1Q6J4K2 584 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 PDXDC1Q6P996 788 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 STXBP4Q6ZWJ1 553 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 GPD1LQ8N335 351 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 CXorf38Q8TB03 319 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 RIPOR3Q96MK2 946 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 TSPAN18Q96SJ8 248 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 PLEKHA4Q9H4M7 779 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 DPP3Q9NY33 737 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 FBXL5Q9UKA1 691 aa14.81□□□□□ -0.04
SNX6-203ENST00000555416 WDR27A2RRH5 827 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 FAM86C2PA6NEL3 165 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 XPOTO43592 962 aaKnown RBP14.8□□□□□ -0.04
SNX6-203ENST00000555416 LDHAP00338 332 aaKnown RBP14.8□□□□□ -0.04
SNX6-203ENST00000555416 C1RP00736 705 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 RPN1P04843 607 aaKnown RBP14.8□□□□□ -0.04
SNX6-203ENST00000555416 CYP2J2P51589 502 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms