RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 N4BP1O75113 896 aaKnown RBP11.6□□□□□ -0.55
TDP1-211ENST00000555178 EOMESO95936 686 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 TMEM191BP0C7N4 346 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 POLR2BP30876 1174 aaKnown RBP11.6□□□□□ -0.55
TDP1-211ENST00000555178 GTF2H1P32780 548 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 CCZ1BP86790 482 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 CCZ1P86791 482 aaPredicted RBP11.6□□□□□ -0.55
TDP1-211ENST00000555178 PPIGQ13427 754 aaKnown RBP eCLIP11.6□□□□□ -0.55
TDP1-211ENST00000555178 RAPGEF1Q13905 1077 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 CD300LGQ6UXG3 332 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 TMEM139Q8IV31 216 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
TDP1-211ENST00000555178 TOP1MTQ969P6 601 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 XYLT2Q9H1B5 865 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 PLEKHA5Q9HAU0 1116 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 COQ4Q9Y3A0 265 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 PCDHB7Q9Y5E2 793 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 TRANK1O15050 2925 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 ABHD14A-ACY1A0A1B0GW23 586 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 STX10O60499 249 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 ARHGEF15O94989 841 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 CALCAP01258 141 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 KRT19P08727 400 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 CLCNKBP51801 687 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 ENPEPQ07075 957 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 NCOA4Q13772 614 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 SHHQ15465 462 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 DUOXA2Q1HG44 320 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 FIGNQ5HY92 759 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 HASPINQ8TF76 798 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 PLCB1Q9NQ66 1216 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 CEP72Q9P209 647 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 APEX2Q9UBZ4 518 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 AGAP1Q9UPQ3 857 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 LUC7L2Q9Y383 392 aaKnown RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 NUB1Q9Y5A7 615 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 TBKBP1A7MCY6 615 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 NT5C1B-RDH14C9J2C7 533 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 I3L4J1 428 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 PMM2O15305 246 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 P4HA2O15460 535 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 PHACTR2O75167 634 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 DGKIO75912 1065 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 CLSTN1O94985 981 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 MYOGP15173 224 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 CDR1P51861 262 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 GSDMDP57764 484 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 TRIM14Q14142 442 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 ARHGAP44Q17R89 818 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 NOMO2Q5JPE7 1267 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 WDR59Q6PJI9 974 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 CACNA2D4Q7Z3S7 1137 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 APBB1IPQ7Z5R6 666 aaPredicted RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 TMEM173Q86WV6 379 aaPredicted RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 CCDC150Q8NCX0 1101 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 PGBD4Q96DM1 585 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 TRIM44Q96DX7 344 aaPredicted RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 NAA15Q9BXJ9 866 aaKnown RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 GPR88Q9GZN0 384 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 ELAC1Q9H777 363 aaKnown RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 RC3H2Q9HBD1 1191 aaKnown RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
TDP1-211ENST00000555178 DNAJC12Q9UKB3 198 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 PYCARDQ9ULZ3 195 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 C2CD2Q9Y426 696 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 TSC2P49815 1807 aa11.59□□□□□ -0.55
TDP1-211ENST00000555178 PLXNA4Q9HCM2 1894 aa11.58□□□□□ -0.55
TDP1-211ENST00000555178 SZT2Q5T011 3432 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 A0A1W2PQJ5 194 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 LCHNA4D1U4 455 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 HCRTO43612 131 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 THP07101 528 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 RABGGTBP53611 331 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 ARID5AQ03989 594 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 MTF1Q14872 753 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 KYAT1Q16773 422 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 C9orf57Q5W0N0 161 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 PDXDC1Q6P996 788 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 CNGA4Q8IV77 575 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 PPM1KQ8N3J5 372 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 BCL7CQ8WUZ0 217 aaPredicted RBP11.58□□□□□ -0.56
TDP1-211ENST00000555178 ANKRD36BP1Q96IX9 119 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 KREMEN1Q96MU8 473 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 RPS6KC1Q96S38 1066 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 DNAJC7Q99615 494 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 NUP58Q9BVL2 599 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 SDCBP2Q9H190 292 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 NRDE2Q9H7Z3 1164 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 UBE2TQ9NPD8 197 aaPredicted RBP11.58□□□□□ -0.56
TDP1-211ENST00000555178 LRFN2Q9ULH4 789 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 NME7Q9Y5B8 376 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 ANO9A1A5B4 782 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 SOWAHDA6NJG2 315 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 INPPL1O15357 1258 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 TNNC2P02585 160 aa11.58□□□□□ -0.56
TDP1-211ENST00000555178 PLEKP08567 350 aaPredicted RBP11.58□□□□□ -0.56
TDP1-211ENST00000555178 RAP1GAPP47736 663 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms