RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 C5orf67F2Z3F1 127 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 B3GAT3O94766 335 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 ATP1A3P13637 1013 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 DNAJB2P25686 324 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 POLR2BP30876 1174 aaKnown RBP17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 BMPR1AP36894 532 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 ERVK-21P61565 698 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 MYL7Q01449 175 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 MYO1EQ12965 1108 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 NCOA4Q13772 614 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 CBWD6Q4V339 395 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 CBWD3Q5JTY5 395 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 MIIPQ5JXC2 388 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 CBWD5Q5RIA9 395 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 SLC39A11Q8N1S5 342 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 RNF214Q8ND24 703 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 TGS1Q96RS0 853 aaKnown RBP17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 PAAF1Q9BRP4 392 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 VRTNQ9H8Y1 702 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 SLC28A3Q9HAS3 691 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 SPG21Q9NZD8 308 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 HCSTQ9UBK5 93 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 AGAP1Q9UPQ3 857 aa17.72■□□□□ 0.43
SPTLC2-203ENST00000554901 TMEM265A0A087WTH1 108 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 KRT19P08727 400 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 MYOGP15173 224 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 PBX2P40425 430 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 AARSP49588 968 aaKnown RBP eCLIP17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 TAF6P49848 677 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 GUCY2FP51841 1108 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 COPB1P53618 953 aaKnown RBP17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 TAP1Q03518 808 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 ELAVL2Q12926 359 aaKnown RBP17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 SGSM1Q2NKQ1 1148 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 SV2CQ496J9 727 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 FILIP1LQ4L180 1135 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 APTXQ7Z2E3 356 aaKnown RBP17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 GAS2L3Q86XJ1 694 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 IGSF21Q96ID5 467 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 FAXDC2Q96IV6 333 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 IMPG2Q9BZV3 1241 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 RAB20Q9NX57 234 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 ADAM28Q9UKQ2 775 aa17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 PRG3Q9Y2Y8 225 aaPredicted RBP17.71■□□□□ 0.43
SPTLC2-203ENST00000554901 ARHGEF37A1IGU5 675 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 KIF4AO95239 1232 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 VNN1O95497 513 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 CST3P01034 146 aaPredicted RBP17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 HLA-DRAP01903 254 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 PIK3CAP42336 1068 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 PLCB3Q01970 1234 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 PPP2R2DQ66LE6 453 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 CCDC150Q8NCX0 1101 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 TAS1R2Q8TE23 839 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 TIFAQ96CG3 184 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 TMEM169Q96HH4 297 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 MMRN2Q9H8L6 949 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 MARCH5Q9NX47 278 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 TAB2Q9NYJ8 693 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
SPTLC2-203ENST00000554901 LGALS16A8MUM7 142 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 TADA2AO75478 443 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 ASS1P00966 412 aaKnown RBP17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 CTNNB1P35222 781 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 LILRA4P59901 499 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 KRT17Q04695 432 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 EPC2Q52LR7 807 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 FKBP15Q5T1M5 1219 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 C3orf58Q8NDZ4 430 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 HPDLQ96IR7 371 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 FAM84AQ96KN4 292 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 C11orf84Q9BUA3 381 aaPredicted RBP17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 XYLT2Q9H1B5 865 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 RBSNQ9H1K0 784 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 VPS16Q9H269 839 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 NKX2-4Q9H2Z4 354 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 GDAP2Q9NXN4 497 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 TRIOBPQ9H2D6 2365 aa17.69■□□□□ 0.42
SPTLC2-203ENST00000554901 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.424e-6■■■■■ 145.4
SPTLC2-203ENST00000554901 EFEMP2O95967 443 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 SERPINC1P01008 464 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 UBE3AQ05086 875 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 UVSSAQ2YD98 709 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 CD300LGQ6UXG3 332 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 GBP6Q6ZN66 633 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 SUSD3Q96L08 255 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 GBF1Q92538 1859 aa17.68■□□□□ 0.42
SPTLC2-203ENST00000554901 A0A1B0GTH6 734 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 KPNA7A9QM74 516 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 NT5C1B-RDH14C9J2C7 533 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 PES1O00541 588 aaKnown RBP17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 PPEF2O14830 753 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 FGF18O76093 207 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 ARHGEF15O94989 841 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 FAM163BP0C2L3 166 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 P4HA1P13674 534 aa17.67■□□□□ 0.42
SPTLC2-203ENST00000554901 PBX3P40426 434 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms