RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 INO80Q9ULG1 1556 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 TMCC1O94876 653 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 SSTR3P32745 418 aaPredicted RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 LBRQ14739 615 aaKnown RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 XKR3Q5GH77 459 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 DAB2IPQ5VWQ8 1189 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 BARGINQ6ZT62 677 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 DDX42Q86XP3 938 aaKnown RBP eCLIP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 PGBD4Q96DM1 585 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 SERPINB12Q96P63 405 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 CELF4Q9BZC1 486 aaKnown RBP14.66□□□□□ -0.06
VTI1B-204ENST00000554659 NEUROG2Q9H2A3 272 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 CXorf56Q9H5V9 222 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 SATB2Q9UPW6 733 aa14.66□□□□□ -0.06
VTI1B-204ENST00000554659 SERPINI2O75830 405 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 FNTAP49354 379 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 ITGA8P53708 1063 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 TNIP3Q96KP6 325 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 LBHD1Q9BQE6 289 aaPredicted RBP14.65□□□□□ -0.06
VTI1B-204ENST00000554659 SP110Q9HB58 689 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 H0Y626 953 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 TRIM16O95361 564 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 PRKCBP05771 671 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 RPA1P27694 616 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 MAP3K7CLP57077 242 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 GRIN1Q05586 938 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 PTK7Q13308 1070 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 NKX1-1Q15270 411 aaPredicted RBP14.65□□□□□ -0.06
VTI1B-204ENST00000554659 SMAD1Q15797 465 aaKnown RBP14.65□□□□□ -0.06
VTI1B-204ENST00000554659 KYNUQ16719 465 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 TRIM60Q495X7 471 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 SCN4BQ8IWT1 228 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 DDIASQ8IXT1 998 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 ZNF34Q8IZ26 560 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 AGR3Q8TD06 166 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 KIF12Q96FN5 646 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 FUCA2Q9BTY2 467 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 RAB6BQ9NRW1 208 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 DAGLAQ9Y4D2 1042 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 APRTP07741 180 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 MYL3P08590 195 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 COILP38432 576 aaPredicted RBP14.65□□□□□ -0.06
VTI1B-204ENST00000554659 SESN2P58004 480 aaPredicted RBP14.65□□□□□ -0.06
VTI1B-204ENST00000554659 CDK17Q00537 523 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 OR6P1Q8NGX9 317 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 GCNAQ96QF7 691 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 TMEM8AQ9HCN3 771 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 AURKCQ9UQB9 309 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 HPSEQ9Y251 543 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 PSMD3O43242 534 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 SPP2Q13103 211 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 KRT33BQ14525 404 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 GPR162Q16538 588 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 UGP2Q16851 508 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 WDR72Q3MJ13 1102 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 C16orf89Q6UX73 402 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 TPCN2Q8NHX9 752 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 MYO3AQ8NEV4 1616 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 ATP9BO43861 1147 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 PDHBP11177 359 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 KCNA3P22001 575 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 SLC29A2Q14542 456 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 SGSM1Q2NKQ1 1148 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 FIGNQ5HY92 759 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 MCEEQ96PE7 176 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 EPAS1Q99814 870 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 PAK5Q9P286 719 aa14.65□□□□□ -0.06
VTI1B-204ENST00000554659 RASA1P20936 1047 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 COPB2P35606 906 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 ABCE1P61221 599 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 UBE3AQ05086 875 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 NCOA4Q13772 614 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 LRRC36Q1X8D7 754 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 PAPD7Q5XG87 772 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 SLC30A9Q6PML9 568 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 MARCH10Q8NA82 808 aaPredicted RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 PPHLN1Q8NEY8 458 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 CMTM5Q96DZ9 223 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 SPATA33Q96N06 139 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 ZNF212Q9UDV6 495 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 CDV3Q9UKY7 258 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 DEAF1O75398 565 aaPredicted RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 PDGFRAP16234 1089 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 HNRNPH1P31943 449 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 MRPS35P82673 323 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 ARHGEF6Q15052 776 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 KCNV1Q6PIU1 500 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 CASKIN2Q8WXE0 1202 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 RUBCNLQ9H714 662 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 PAIP2BQ9ULR5 123 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 KRT8P05787 483 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 SNRPAP09012 282 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 MAP4P27816 1152 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 SERPINB10P48595 397 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 RNF135Q8IUD6 432 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 KRT35Q92764 455 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 SLC10A4Q96EP9 437 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 ADNPQ9H2P0 1102 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 IGF2BP3O00425 579 aaKnown RBP eCLIP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 ANGPT2O15123 496 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms