RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 EPHB6O15197 1021 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 OFD1O75665 1012 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 VNN1O95497 513 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 ASS1P00966 412 aaKnown RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 SKILP12757 684 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 FERP16591 822 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 PAX3P23760 479 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 POLR2BP30876 1174 aaKnown RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 RPL9P32969 192 aaKnown RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 USP8P40818 1118 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 TNNC1P63316 161 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 NOP14P78316 857 aaKnown RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 GCNT1Q02742 428 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 DRAP1Q14919 205 aaPredicted RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 GPNMBQ14956 572 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 ASIC2Q16515 512 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 GLRA4Q5JXX5 417 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 PHLDB3Q6NSJ2 640 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 CYP26C1Q6V0L0 522 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 AGMOQ6ZNB7 445 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 UBE2Q1Q7Z7E8 422 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 LRRC52Q8N7C0 313 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 HPDLQ96IR7 371 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 ZNF560Q96MR9 790 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 ZMAT2Q96NC0 199 aaKnown RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 FAM193BQ96PV7 902 aaPredicted RBP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 DNAJC7Q99615 494 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 PI4K2AQ9BTU6 479 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 PLAGL2Q9UPG8 496 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 INPP5FQ9Y2H2 1132 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 HTTP42858 3142 aa11.24□□□□□ -0.61
TMEM55B-205ENST00000554028 TRIM43BA6NCK2 446 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 MEFVO15553 781 aaPredicted RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 EVI5O60447 810 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 IPO7O95373 1038 aaKnown RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 STAU1O95793 577 aaKnown RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 AMHP03971 560 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 HNRNPH3P31942 346 aaKnown RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 SOX5P35711 763 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 BPIFB4P59827 614 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 APBA1Q02410 837 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 RNASELQ05823 741 aaKnown RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 KLHL30Q0D2K2 578 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 GRIK3Q13003 919 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.614e-9■■□□□ 14.4
TMEM55B-205ENST00000554028 CUL2Q13617 745 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 ARID5BQ14865 1188 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 WDR72Q3MJ13 1102 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 SV2CQ496J9 727 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 NOMO2Q5JPE7 1267 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 GJB7Q6PEY0 223 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 ZNF598Q86UK7 904 aaKnown RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 VPS36Q86VN1 386 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 NPAS4Q8IUM7 802 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 ARHGEF19Q8IW93 802 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 TTC39CQ8N584 583 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 BAP1Q92560 729 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 TATDN2Q93075 761 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 C18orf25Q96B23 403 aaPredicted RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 TRIM43Q96BQ3 446 aaPredicted RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 CCDC42Q96M95 316 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 UROC1Q96N76 676 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 PPP1R10Q96QC0 940 aaKnown RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 DEF6Q9H4E7 631 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 AIPL1Q9NZN9 384 aa11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 NXF1Q9UBU9 619 aaKnown RBP11.23□□□□□ -0.61
TMEM55B-205ENST00000554028 F8VZ95 297 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 RNF225M0QZC1 329 aaPredicted RBP11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 PTGESO14684 152 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 ARHGAP6O43182 974 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 GFPT2O94808 682 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 POMCP01189 267 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 SERPING1P05155 500 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 KRT5P13647 590 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 CSF2RAP15509 400 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 LRPAP1P30533 357 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 CYLC1P35663 651 aaPredicted RBP11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 TAF6P49848 677 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 SCNN1GP51170 649 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 CDK17Q00537 523 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 ARID5AQ03989 594 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 TUSC3Q13454 348 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 TDRD12Q587J7 1177 aaKnown RBP11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 C9orf57Q5W0N0 161 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 HELQQ8TDG4 1101 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 ABHD8Q96I13 439 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 FAM84AQ96KN4 292 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 MMS19Q96T76 1030 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 LBHD1Q9BQE6 289 aaPredicted RBP11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 MRPL9Q9BYD2 267 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms