RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 PDXDC1Q6P996 788 aa25.2■■□□□ 1.62
NEK9-203ENST00000553945 CBWD2Q8IUF1 395 aa25.2■■□□□ 1.62
NEK9-203ENST00000553945 RDH13Q8NBN7 331 aa25.2■■□□□ 1.62
NEK9-203ENST00000553945 GOLGA5Q8TBA6 731 aa25.2■■□□□ 1.62
NEK9-203ENST00000553945 LNX1Q8TBB1 728 aaPredicted RBP25.2■■□□□ 1.62
NEK9-203ENST00000553945 APOL5Q9BWW9 433 aa25.2■■□□□ 1.62
NEK9-203ENST00000553945 DPP3Q9NY33 737 aa25.2■■□□□ 1.62
NEK9-203ENST00000553945 C5orf42Q9H799 3197 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 PLXNA3P51805 1871 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 PPEF2O14830 753 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 MBTPS2O43462 519 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 KIF20AO95235 890 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 SMC2O95347 1197 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 TFAMQ00059 246 aaKnown RBP25.19■■□□□ 1.62
NEK9-203ENST00000553945 SMAD4Q13485 552 aaKnown RBP25.19■■□□□ 1.62
NEK9-203ENST00000553945 PALB2Q86YC2 1186 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 NT5DC4Q86YG4 428 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 XXYLT1Q8NBI6 393 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 ADAMTS19Q8TE59 1207 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 SUSD3Q96L08 255 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 PDE11AQ9HCR9 933 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 RMND1Q9NWS8 449 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 MAPK8IP1Q9UQF2 711 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 FAM50BQ9Y247 325 aa25.19■■□□□ 1.62
NEK9-203ENST00000553945 PRPF40AO75400 957 aaKnown RBP25.18■■□□□ 1.62
NEK9-203ENST00000553945 IL9P15248 144 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 HOXB8P17481 243 aaPredicted RBP25.18■■□□□ 1.62
NEK9-203ENST00000553945 UBE2HP62256 183 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 SNRNP35Q16560 246 aaKnown RBP25.18■■□□□ 1.62
NEK9-203ENST00000553945 C9orf57Q5W0N0 161 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 SYCE2Q6PIF2 218 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 C12orf56Q8IXR9 622 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 SMRP1Q8NCR6 262 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 ERCC4Q92889 916 aaPredicted RBP25.18■■□□□ 1.62
NEK9-203ENST00000553945 FBXL18Q96ME1 805 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 KCTD10Q9H3F6 313 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 DZANK1Q9NVP4 752 aa25.18■■□□□ 1.62
NEK9-203ENST00000553945 SPDYE4A6NLX3 237 aa25.17■■□□□ 1.62
NEK9-203ENST00000553945 GLUD1P00367 558 aa25.17■■□□□ 1.62
NEK9-203ENST00000553945 DSTYKQ6XUX3 929 aa25.17■■□□□ 1.62
NEK9-203ENST00000553945 ANKS3Q6ZW76 656 aa25.17■■□□□ 1.62
NEK9-203ENST00000553945 CACTINQ8WUQ7 758 aaKnown RBP25.17■■□□□ 1.62
NEK9-203ENST00000553945 SMARCE1Q969G3 411 aa25.17■■□□□ 1.62
NEK9-203ENST00000553945 CLSTN3Q9BQT9 956 aa25.17■■□□□ 1.62
NEK9-203ENST00000553945 PCDHB8Q9UN66 801 aa25.17■■□□□ 1.62
NEK9-203ENST00000553945 ANO9A1A5B4 782 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 PIRO00625 290 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 PDXKO00764 312 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 SYN3O14994 580 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 EXOC3O60645 756 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 SPATA31D3P0C874 917 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 SURF1Q15526 300 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 VARS2Q5ST30 1063 aaKnown RBP25.16■■□□□ 1.62
NEK9-203ENST00000553945 SPATA31D4Q6ZUB0 917 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 C12orf76Q8N812 135 aaPredicted RBP25.16■■□□□ 1.62
NEK9-203ENST00000553945 FAM84AQ96KN4 292 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 GSDMAQ96QA5 445 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 COL25A1Q9BXS0 654 aaPredicted RBP25.16■■□□□ 1.62
NEK9-203ENST00000553945 PCDHA5Q9Y5H7 936 aa25.16■■□□□ 1.62
NEK9-203ENST00000553945 ADAM12O43184 909 aa25.15■■□□□ 1.62
NEK9-203ENST00000553945 TGM5O43548 720 aa25.15■■□□□ 1.62
NEK9-203ENST00000553945 LILRA4P59901 499 aa25.15■■□□□ 1.62
NEK9-203ENST00000553945 RARS2Q5T160 578 aaKnown RBP25.15■■□□□ 1.62
NEK9-203ENST00000553945 SMYD4Q8IYR2 804 aaPredicted RBP25.15■■□□□ 1.62
NEK9-203ENST00000553945 GUF1Q8N442 669 aaKnown RBP25.15■■□□□ 1.62
NEK9-203ENST00000553945 APPL2Q8NEU8 664 aa25.15■■□□□ 1.62
NEK9-203ENST00000553945 NECAB3Q96P71 396 aaPredicted RBP25.15■■□□□ 1.62
NEK9-203ENST00000553945 S1PR5Q9H228 398 aa25.15■■□□□ 1.62
NEK9-203ENST00000553945 MAN1C1Q9NR34 630 aa25.15■■□□□ 1.62
NEK9-203ENST00000553945 MTRRQ9UBK8 725 aa25.15■■□□□ 1.62
NEK9-203ENST00000553945 USP15Q9Y4E8 981 aaPredicted RBP25.15■■□□□ 1.62
NEK9-203ENST00000553945 CALUO43852 315 aaPredicted RBP25.14■■□□□ 1.62
NEK9-203ENST00000553945 NR3C1P04150 777 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 TMEM191BP0C7N4 346 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 OR1D2P34982 312 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 AARSP49588 968 aaKnown RBP eCLIP25.14■■□□□ 1.62
NEK9-203ENST00000553945 CYP24A1Q07973 514 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 SMAD2Q15796 467 aaKnown RBP25.14■■□□□ 1.62
NEK9-203ENST00000553945 LMBRD2Q68DH5 695 aaPredicted RBP25.14■■□□□ 1.62
NEK9-203ENST00000553945 ELMSAN1Q6PJG2 1045 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 ELOA2Q8IYF1 753 aaPredicted RBP25.14■■□□□ 1.62
NEK9-203ENST00000553945 UHRF1Q96T88 793 aaPredicted RBP25.14■■□□□ 1.62
NEK9-203ENST00000553945 DMAC2Q9NW81 257 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 DPP7Q9UHL4 492 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 BACE2Q9Y5Z0 518 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 CDY1Q9Y6F8 540 aa25.14■■□□□ 1.62
NEK9-203ENST00000553945 H7C4K7 107 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 M0QZQ0 153 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 SPTLC1O15269 473 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 ITGB3P05106 788 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 DLATP10515 647 aaKnown RBP25.13■■□□□ 1.61
NEK9-203ENST00000553945 PAX3P23760 479 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 ZNF658Q5TYW1 1059 aaPredicted RBP25.13■■□□□ 1.61
NEK9-203ENST00000553945 CES5AQ6NT32 575 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 RSPO2Q6UXX9 243 aaPredicted RBP25.13■■□□□ 1.61
NEK9-203ENST00000553945 SLC9A9Q8IVB4 645 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 C1orf127Q8N9H9 656 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 SPATA20Q8TB22 786 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 CCDC127Q96BQ5 260 aa25.13■■□□□ 1.61
NEK9-203ENST00000553945 ANKRD36BP1Q96IX9 119 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms