RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 XYLT2Q9H1B5 865 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 NDST4Q9H3R1 872 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 CDH23Q9H251 3354 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 N4BP1O75113 896 aaKnown RBP19.45■□□□□ 0.7
PSEN1-208ENST00000553719 KIF4AO95239 1232 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 STAU1O95793 577 aaKnown RBP19.45■□□□□ 0.7
PSEN1-208ENST00000553719 CST3P01034 146 aaPredicted RBP19.45■□□□□ 0.7
PSEN1-208ENST00000553719 ITGB1P05556 798 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 POLR2BP30876 1174 aaKnown RBP19.45■□□□□ 0.7
PSEN1-208ENST00000553719 PBX3P40426 434 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 KCNT2Q6UVM3 1135 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 SPRED2Q7Z698 418 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 SLC39A11Q8N1S5 342 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 LMO3Q8TAP4 145 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 FAM193BQ96PV7 902 aaPredicted RBP19.45■□□□□ 0.7
PSEN1-208ENST00000553719 VRTNQ9H8Y1 702 aa19.45■□□□□ 0.7
PSEN1-208ENST00000553719 GTPBP10A4D1E9 387 aaKnown RBP19.44■□□□□ 0.7
PSEN1-208ENST00000553719 CARNS1A5YM72 827 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 C5orf67F2Z3F1 127 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 SPTLC1O15269 473 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 LRRN2O75325 713 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 HLA-DRAP01903 254 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 PRKCSHP14314 528 aaPredicted RBP19.44■□□□□ 0.7
PSEN1-208ENST00000553719 TPM4P67936 248 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 RBP5P82980 135 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 MYL7Q01449 175 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 TAP1Q03518 808 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 BIRC3Q13489 604 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 NCOA4Q13772 614 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 DCLRE1AQ6PJP8 1040 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 CREBRFQ8IUR6 639 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 RNF168Q8IYW5 571 aaPredicted RBP19.44■□□□□ 0.7
PSEN1-208ENST00000553719 FBXL13Q8NEE6 735 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 RABGGTAQ92696 567 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 SEMA4DQ92854 862 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 ZNF558Q96NG5 402 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 MMRN2Q9H8L6 949 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 TSC2P49815 1807 aa19.44■□□□□ 0.7
PSEN1-208ENST00000553719 TRANK1O15050 2925 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 A0A1B0GTH6 734 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 LGALS16A8MUM7 142 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 ASS1P00966 412 aaKnown RBP19.43■□□□□ 0.7
PSEN1-208ENST00000553719 ALDH2P05091 517 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 CDK11BP21127 795 aaKnown RBP19.43■□□□□ 0.7
PSEN1-208ENST00000553719 OR1G1P47890 313 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 ANKRD20A12PQ8NF67 263 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 IGSF21Q96ID5 467 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 VN1R3Q9BXE9 311 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 VPS16Q9H269 839 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 NKX2-4Q9H2Z4 354 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 AGAP1Q9UPQ3 857 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 FAN1Q9Y2M0 1017 aa19.43■□□□□ 0.7
PSEN1-208ENST00000553719 PRG3Q9Y2Y8 225 aaPredicted RBP19.43■□□□□ 0.7
PSEN1-208ENST00000553719 PLXNA4Q9HCM2 1894 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 NT5C1B-RDH14C9J2C7 533 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 DNAJB2P25686 324 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 BMPR1AP36894 532 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 PNPLA4P41247 253 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 ALDH7A1P49419 539 aaKnown RBP19.42■□□□□ 0.7
PSEN1-208ENST00000553719 LILRA4P59901 499 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 MYL6P60660 151 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 ERVK-21P61565 698 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 FANCCQ00597 558 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 DPY19L2P1Q6NXN4 242 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 LIMS2Q7Z4I7 341 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 ZNF560Q96MR9 790 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 NAP1L5Q96NT1 182 aaPredicted RBP19.42■□□□□ 0.7
PSEN1-208ENST00000553719 C17orf80Q9BSJ5 609 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 PLVAPQ9BX97 442 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 RTN4Q9NQC3 1192 aaKnown RBP19.42■□□□□ 0.7
PSEN1-208ENST00000553719 RAB20Q9NX57 234 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 MSRAQ9UJ68 235 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 ADAM28Q9UKQ2 775 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 RWDD3Q9Y3V2 267 aa19.42■□□□□ 0.7
PSEN1-208ENST00000553719 VWA8A3KMH1 1905 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 TULP1O00294 542 aaPredicted RBP19.41■□□□□ 0.7
PSEN1-208ENST00000553719 B3GAT3O94766 335 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 KRT19P08727 400 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 PAX3P23760 479 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 ATICP31939 592 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 PPM1AP35813 382 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 PIK3CAP42336 1068 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 TAF6P49848 677 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 TAF4BQ92750 862 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 HPDLQ96IR7 371 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 SAMD11Q96NU1 681 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 COLEC11Q9BWP8 271 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 APOBEC3GQ9HC16 384 aaKnown RBP19.41■□□□□ 0.7
PSEN1-208ENST00000553719 AAASQ9NRG9 546 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 GDAP2Q9NXN4 497 aa19.41■□□□□ 0.7
PSEN1-208ENST00000553719 M0QZQ0 153 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 AP5Z1O43299 807 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 PHACTR2O75167 634 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 PLCB3Q01970 1234 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 KCNMA1Q12791 1236 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 TRPC3Q13507 836 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 NR1I3Q14994 352 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 SGSM1Q2NKQ1 1148 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 SV2CQ496J9 727 aa19.4■□□□□ 0.7
PSEN1-208ENST00000553719 TIGD5Q53EQ6 642 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms