RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 BFSP1Q12934 665 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 BIRC3Q13489 604 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 USP41Q3LFD5 358 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 CCDC40Q4G0X9 1142 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 CT47A1Q5JQC4 288 aaPredicted RBP14.95□□□□□ -0.02
TUBB3-202ENST00000553656 FAM171A1Q5VUB5 890 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 CEP57Q86XR8 500 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 PARD3BQ8TEW8 1205 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 GPR62Q9BZJ7 368 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 ZBP1Q9H171 429 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 NSUN3Q9H649 340 aaKnown RBP14.95□□□□□ -0.02
TUBB3-202ENST00000553656 METTL14Q9HCE5 456 aaKnown RBP14.95□□□□□ -0.02
TUBB3-202ENST00000553656 MRPL17Q9NRX2 175 aaKnown RBP14.95□□□□□ -0.02
TUBB3-202ENST00000553656 MTCH2Q9Y6C9 303 aa14.95□□□□□ -0.02
TUBB3-202ENST00000553656 MYO9BQ13459 2157 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-202ENST00000553656 STX10O60499 249 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 CXCL14O95715 111 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 GNA14O95837 355 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 ERCC5P28715 1186 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-202ENST00000553656 BRCC3P46736 316 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 TAF6P49848 677 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 ERVFC1P60507 584 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 RBP5P82980 135 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 ENPEPQ07075 957 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 TRPC3Q13507 836 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 SV2CQ496J9 727 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 DCAF17Q5H9S7 520 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-202ENST00000553656 PDXDC1Q6P996 788 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 DSTYKQ6XUX3 929 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-202ENST00000553656 ZC3H3Q8IXZ2 948 aaKnown RBP14.94□□□□□ -0.02
TUBB3-202ENST00000553656 C1orf127Q8N9H9 656 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 C3orf58Q8NDZ4 430 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 OR5B17Q8NGF7 314 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 POP1Q99575 1024 aaKnown RBP14.94□□□□□ -0.02
TUBB3-202ENST00000553656 TTPALQ9BTX7 342 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 VN1R3Q9BXE9 311 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 ARMCX3Q9UH62 379 aaPredicted RBP14.94□□□□□ -0.02
TUBB3-202ENST00000553656 AGAP1Q9UPQ3 857 aa14.94□□□□□ -0.02
TUBB3-202ENST00000553656 PTPRJQ12913 1337 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 ANO9A1A5B4 782 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 LRRIQ3A6PVS8 624 aaPredicted RBP14.93□□□□□ -0.02
TUBB3-202ENST00000553656 I3L4J1 428 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 PIRO00625 290 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 C2CD2LO14523 706 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 IKBKBO14920 756 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 FSCN2O14926 492 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 IRS1P35568 1242 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 CREMQ03060 361 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 MYO1EQ12965 1108 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 CAMK1Q14012 370 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 NFKBIBQ15653 356 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 TCERG1LQ5VWI1 586 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 TRAPPC11Q7Z392 1133 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 FILIP1Q7Z7B0 1213 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 LRRC52Q8N7C0 313 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 APPL2Q8NEU8 664 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 RIN2Q8WYP3 895 aaPredicted RBP14.93□□□□□ -0.02
TUBB3-202ENST00000553656 SUSD3Q96L08 255 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 DUSP9Q99956 384 aaKnown RBP14.93□□□□□ -0.02
TUBB3-202ENST00000553656 SRRTQ9BXP5 876 aaKnown RBP14.93□□□□□ -0.02
TUBB3-202ENST00000553656 EMILIN2Q9BXX0 1053 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 NAT10Q9H0A0 1025 aaKnown RBP14.93□□□□□ -0.02
TUBB3-202ENST00000553656 MMRN2Q9H8L6 949 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 STXBP5LQ9Y2K9 1186 aa14.93□□□□□ -0.02
TUBB3-202ENST00000553656 FSD2A1L4K1 749 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 PPEF2O14830 753 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 SYN3O14994 580 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 TRIM49P0CI25 452 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 TRIM49CP0CI26 452 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 CCDC192P0DO97 292 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 ODC1P11926 461 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 LILRA4P59901 499 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 DLG4P78352 724 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 CLDN10P78369 228 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 DSG1Q02413 1049 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 TYRO3Q06418 890 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 SKIV2LQ15477 1246 aaKnown RBP14.92□□□□□ -0.02
TUBB3-202ENST00000553656 PTPN14Q15678 1187 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 TCEAL5Q5H9L2 206 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 TAS1R1Q7RTX1 841 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 FRMD5Q7Z6J6 570 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 FAM114A1Q8IWE2 563 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 RNF168Q8IYW5 571 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-202ENST00000553656 TMEM130Q8N3G9 435 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 MRPL43Q8N983 215 aaKnown RBP14.92□□□□□ -0.02
TUBB3-202ENST00000553656 PLEKHO2Q8TD55 490 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 AUTS2Q8WXX7 1259 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 FAM84AQ96KN4 292 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 B3GALT6Q96L58 329 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 TLE6Q9H808 572 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.92□□□□□ -0.02
TUBB3-202ENST00000553656 CHST7Q9NS84 486 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 MAGEC2Q9UBF1 373 aaPredicted RBP14.92□□□□□ -0.02
TUBB3-202ENST00000553656 PCDHB8Q9UN66 801 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 CHD9Q3L8U1 2897 aa14.92□□□□□ -0.02
TUBB3-202ENST00000553656 C2orf71A6NGG8 1288 aa14.91□□□□□ -0.02
TUBB3-202ENST00000553656 KPNA7A9QM74 516 aa14.91□□□□□ -0.02
TUBB3-202ENST00000553656 EFEMP2O95967 443 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms