RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 RBSNQ9H1K0 784 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 GOLGA2P5Q9HBQ8 144 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 TAB2Q9NYJ8 693 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 SIX4Q9UIU6 781 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 AGAP1Q9UPQ3 857 aa20.84■□□□□ 0.93
PSEN1-207ENST00000553599 COLQQ9Y215 455 aaPredicted RBP20.84■□□□□ 0.93
PSEN1-207ENST00000553599 LCHNA4D1U4 455 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 SERPINC1P01008 464 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 CA3P07451 260 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 KRT19P08727 400 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 LINC00271P0C7V0 271 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 POLR2BP30876 1174 aaKnown RBP20.83■□□□□ 0.93
PSEN1-207ENST00000553599 SLC11A1P49279 550 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 GUCY2FP51841 1108 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 SGSM1Q2NKQ1 1148 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 UVSSAQ2YD98 709 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 CBWD6Q4V339 395 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 CBWD3Q5JTY5 395 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 CBWD5Q5RIA9 395 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 CCDC150Q8NCX0 1101 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 IMPG2Q9BZV3 1241 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 VPS16Q9H269 839 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 MMRN2Q9H8L6 949 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 VRTNQ9H8Y1 702 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 RAB20Q9NX57 234 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 SPG21Q9NZD8 308 aa20.83■□□□□ 0.93
PSEN1-207ENST00000553599 RANBP2P49792 3224 aaKnown RBP20.82■□□□□ 0.92
PSEN1-207ENST00000553599 ARHGEF37A1IGU5 675 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 LGALS16A8MUM7 142 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 TRAPPC3O43617 180 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 B3GAT3O94766 335 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 HLA-DRAP01903 254 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 RB1P06400 928 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 BMPR1AP36894 532 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 PIK3CAP42336 1068 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 TAF6P49848 677 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 ELAVL2Q12926 359 aaKnown RBP20.82■□□□□ 0.92
PSEN1-207ENST00000553599 SV2CQ496J9 727 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 FKBP15Q5T1M5 1219 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 TAS1R2Q8TE23 839 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 HPDLQ96IR7 371 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 FAXDC2Q96IV6 333 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 TGS1Q96RS0 853 aaKnown RBP20.82■□□□□ 0.92
PSEN1-207ENST00000553599 HCSTQ9UBK5 93 aa20.82■□□□□ 0.92
PSEN1-207ENST00000553599 YBX2Q9Y2T7 364 aaKnown RBP20.82■□□□□ 0.92
PSEN1-207ENST00000553599 A0A1B0GTH6 734 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 C5orf67F2Z3F1 127 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 PES1O00541 588 aaKnown RBP20.81■□□□□ 0.92
PSEN1-207ENST00000553599 VNN1O95497 513 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 CST3P01034 146 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-207ENST00000553599 TPM3P06753 285 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 MYOGP15173 224 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 AARSP49588 968 aaKnown RBP eCLIP20.81■□□□□ 0.92
PSEN1-207ENST00000553599 LILRA4P59901 499 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 ERVK-21P61565 698 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 FANCCQ00597 558 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 EPC2Q52LR7 807 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 GBP6Q6ZN66 633 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 SLC39A11Q8N1S5 342 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 IGSF21Q96ID5 467 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 FAM84AQ96KN4 292 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 PAAF1Q9BRP4 392 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 SLC28A3Q9HAS3 691 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 ADAM28Q9UKQ2 775 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 PRG3Q9Y2Y8 225 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-207ENST00000553599 NUB1Q9Y5A7 615 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 GBF1Q92538 1859 aa20.81■□□□□ 0.92
PSEN1-207ENST00000553599 TADA2AO75478 443 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 KIF4AO95239 1232 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 ASS1P00966 412 aaKnown RBP20.8■□□□□ 0.92
PSEN1-207ENST00000553599 DNAJB2P25686 324 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 PBX2P40425 430 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 MYL6P60660 151 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 PLCB3Q01970 1234 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 TAP1Q03518 808 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 WDR44Q5JSH3 913 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 EHBP1Q8NDI1 1231 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 TMEM169Q96HH4 297 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 XYLT2Q9H1B5 865 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 RTN4Q9NQC3 1192 aaKnown RBP20.8■□□□□ 0.92
PSEN1-207ENST00000553599 MARCH5Q9NX47 278 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 GDAP2Q9NXN4 497 aa20.8■□□□□ 0.92
PSEN1-207ENST00000553599 SF3B1O75533 1304 aaKnown RBP eCLIP20.79■□□□□ 0.926e-7■■■■■ 93.2
PSEN1-207ENST00000553599 KPNA7A9QM74 516 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 CBFA2T2O43439 604 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 P4HA1P13674 534 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 CTNNB1P35222 781 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 KRT17Q04695 432 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 EXOC3L4Q17RC7 722 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 ZNF699Q32M78 642 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 SMYD5Q6GMV2 418 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 SARM1Q6SZW1 724 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 CD300LGQ6UXG3 332 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 C3orf58Q8NDZ4 430 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 TIFAQ96CG3 184 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 C11orf84Q9BUA3 381 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-207ENST00000553599 NKX2-4Q9H2Z4 354 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 GCNT4Q9P109 453 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 LZTS1Q9Y250 596 aa20.79■□□□□ 0.92
PSEN1-207ENST00000553599 KIAA1671Q9BY89 1806 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms