RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 CR1LQ2VPA4 569 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 ARHGAP36Q6ZRI8 547 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 OTOP1Q7RTM1 612 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 ERO1BQ86YB8 467 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 FOXP4Q8IVH2 680 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-220ENST00000553491 FAM126BQ8IXS8 530 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 LCORLQ8N3X6 602 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 KBTBD3Q8NAB2 608 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 FEZF2Q8TBJ5 459 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 SH3RF2Q8TEC5 729 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 USP7Q93009 1102 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 DDX11Q96FC9 970 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 TTC1Q99614 292 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 OSBPL5Q9H0X9 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-220ENST00000553491 DHX36Q9H2U1 1008 aaKnown RBP5.54□□□□□ -1.52
ATXN3-220ENST00000553491 SLC6A20Q9NP91 592 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 HOMER2Q9NSB8 354 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 RNF186Q9NXI6 227 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 PI4KBQ9UBF8 816 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 ZHX2Q9Y6X8 837 aa5.54□□□□□ -1.52
ATXN3-220ENST00000553491 COL11A1P12107 1806 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 FLT1P17948 1338 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CYP2D7A0A087X1C5 515 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CCL15-CCL14A0A0B4J2E2 113 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 MANSC4A6NHS7 340 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 TRIM75PA6NK02 468 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 KCNK3O14649 394 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 GPR39O43194 453 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 BRINP1O60477 761 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 GAS7O60861 476 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 ZFYP08048 801 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 PDGFRBP09619 1106 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CYP2D6P10635 497 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 ADCYAP1R1P41586 468 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 TDO2P48775 406 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 INHBEP58166 350 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 UBE3CQ15386 1083 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CCL15Q16663 113 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CERKLQ49MI3 558 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 BRDTQ58F21 947 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CREB3L3Q68CJ9 461 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 FSTL4Q6MZW2 842 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 PTRH1Q86Y79 214 aaKnown RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CERS3Q8IU89 383 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CHTF18Q8WVB6 975 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 EVI5LQ96CN4 794 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 SEC62Q99442 399 aaKnown RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 C11orf84Q9BUA3 381 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 PUS7LQ9H0K6 701 aaKnown RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 IFT22Q9H7X7 185 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 TYW1Q9NV66 732 aaKnown RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 THG1LQ9NWX6 298 aaKnown RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-220ENST00000553491 ZKSCAN5Q9Y2L8 839 aa5.53□□□□□ -1.52
ATXN3-220ENST00000553491 SSC5DA1L4H1 1573 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 MAN2B1O00754 1011 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 HGSO14964 777 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 ZEB2O60315 1214 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 CYP2C8P10632 490 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 CETPP11597 493 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 TM4SF4P48230 202 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 PLCD1P51178 756 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 GUCY2FP51841 1108 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 IL2P60568 153 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 PPATQ06203 517 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 SPP2Q13103 211 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 SART3Q15020 963 aaKnown RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 ARHGAP44Q17R89 818 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 STEAP3Q658P3 488 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 FERMT3Q86UX7 667 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 SCYL3Q8IZE3 742 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 UHMK1Q8TAS1 419 aaKnown RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 DYNLL2Q96FJ2 89 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 RIOK1Q9BRS2 568 aaKnown RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 NACAP1Q9BZK3 213 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 DIAPH3Q9NSV4 1193 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 ATP8A2Q9NTI2 1148 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 SPTLC3Q9NUV7 552 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 RTEL1Q9NZ71 1219 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 H2AFY2Q9P0M6 372 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 STAP2Q9UGK3 403 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 SERPINB13Q9UIV8 391 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 DSEQ9UL01 958 aa5.52□□□□□ -1.53
ATXN3-220ENST00000553491 ISY1Q9ULR0 285 aaKnown RBP5.52□□□□□ -1.53
ATXN3-220ENST00000553491 WASF3Q9UPY6 502 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms