RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 CDH23Q9H251 3354 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 PHACTR2O75167 634 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 HARSP12081 509 aaKnown RBP16.41■□□□□ 0.22
ABCD4-218ENST00000553486 TNFRSF8P28908 595 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 TNNT3P45378 269 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-218ENST00000553486 WNT7BP56706 349 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 RNASE9P60153 205 aaKnown RBP16.41■□□□□ 0.22
ABCD4-218ENST00000553486 SNX17Q15036 470 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 C11orf63Q6NUN7 778 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 TAPT1Q6NXT6 567 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 Q7L0L9 218 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 RHPN2Q8IUC4 686 aa16.41■□□□□ 0.22
ABCD4-218ENST00000553486 RBM47A0AV96 593 aaKnown RBP16.4■□□□□ 0.22
ABCD4-218ENST00000553486 OGTO15294 1046 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 MTA2O94776 668 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 VNN1O95497 513 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 RARBP10826 455 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 TBXAS1P24557 533 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-218ENST00000553486 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 SLC7A5Q01650 507 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 ARHGAP1Q07960 439 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 PTPROQ16827 1216 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 ACAD10Q6JQN1 1059 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 EFCAB12Q6NXP0 572 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 IFT20Q8IY31 132 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 HDAC7Q8WUI4 952 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 DDX1Q92499 740 aaKnown RBP16.4■□□□□ 0.22
ABCD4-218ENST00000553486 KRT12Q99456 494 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 COG5Q9UP83 839 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 PCDHB2Q9Y5E7 798 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
ABCD4-218ENST00000553486 CCDC188H7C350 402 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 CYP1A2P05177 515 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 MCL1Q07820 350 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 CLUL1Q15846 466 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 ZBTB33Q86T24 672 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 WDR49Q8IV35 697 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 XPNPEP3Q9NQH7 507 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 TTC7AQ9ULT0 858 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-218ENST00000553486 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
ABCD4-218ENST00000553486 PTPRJQ12913 1337 aa16.4■□□□□ 0.22
ABCD4-218ENST00000553486 ACKR2O00590 384 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 DDX3YO15523 660 aaKnown RBP16.39■□□□□ 0.21
ABCD4-218ENST00000553486 OAS2P29728 719 aaKnown RBP16.39■□□□□ 0.21
ABCD4-218ENST00000553486 CUL2Q13617 745 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 CLEC16AQ2KHT3 1053 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 TRIM60Q495X7 471 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 C1orf53Q5VUE5 145 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 AENQ8WTP8 325 aaKnown RBP16.39■□□□□ 0.21
ABCD4-218ENST00000553486 TRAPPC12Q8WVT3 735 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 EMID1Q96A84 441 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-218ENST00000553486 RPS6KC1Q96S38 1066 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 IMPG2Q9BZV3 1241 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 CARD9Q9H257 536 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-218ENST00000553486 UVRAGQ9P2Y5 699 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 ALG6Q9Y672 507 aa16.39■□□□□ 0.21
ABCD4-218ENST00000553486 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 MAGEB2O15479 319 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 LGALS2P05162 132 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 ZNF865P0CJ78 1059 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-218ENST00000553486 EPHB4P54760 987 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 PTENP60484 403 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 NCOA4Q13772 614 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 MPZL3Q6UWV2 235 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 UBL4BQ8N7F7 174 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 PPTC7Q8NI37 304 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 ELMO3Q96BJ8 720 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 ZNF653Q96CK0 615 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 FAM84AQ96KN4 292 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 NLRP4Q96MN2 994 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 NAP1L3Q99457 506 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-218ENST00000553486 FZD8Q9H461 694 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 RNPEPQ9H4A4 650 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 MTMR10Q9NXD2 777 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 KRIT1O00522 736 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 FAM189A1O60320 539 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 HEXIM1O94992 359 aaKnown RBP16.38■□□□□ 0.21
ABCD4-218ENST00000553486 PGK1P00558 417 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 CLTAP09496 248 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 MYBL2P10244 700 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 AKR1A1P14550 325 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 MRPS25P82663 173 aaKnown RBP16.38■□□□□ 0.21
ABCD4-218ENST00000553486 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 TMEM132AQ24JP5 1023 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 SEZ6Q53EL9 994 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 ATF7IP2Q5U623 682 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 SPOPLQ6IQ16 392 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 MAMDC4Q6UXC1 1216 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 RNF180Q86T96 592 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 OR5B17Q8NGF7 314 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 ZNF564Q8TBZ8 553 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-218ENST00000553486 NUP85Q9BW27 656 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 NFKBIZQ9BYH8 718 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 PRDM5Q9NQX1 630 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms