RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 LINC00301Q8NCQ3 95 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 ZNF461Q8TAF7 563 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 ITFG1Q8TB96 612 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 DNAJC19Q96DA6 116 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 MFSD1Q9H3U5 465 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 MRPL44Q9H9J2 332 aaKnown RBP17.28■□□□□ 0.36
CDK4-215ENST00000553237 CPSF3Q9UKF6 684 aaKnown RBP17.28■□□□□ 0.36
CDK4-215ENST00000553237 FBXL21Q9UKT6 434 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 DUSP12Q9UNI6 340 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
CDK4-215ENST00000553237 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
CDK4-215ENST00000553237 TULP1O00294 542 aaPredicted RBP17.27■□□□□ 0.36
CDK4-215ENST00000553237 ABLIM3O94929 683 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 IDEP14735 1019 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 CYP3A5P20815 502 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 ABCD1P33897 745 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 KCNA1Q09470 495 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 JADE1Q6IE81 842 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 SLC44A3Q8N4M1 653 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 APPL2Q8NEU8 664 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 ZNF396Q96N95 335 aaPredicted RBP17.27■□□□□ 0.36
CDK4-215ENST00000553237 CYP4F11Q9HBI6 524 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 DNMT3BQ9UBC3 853 aaKnown RBP17.27■□□□□ 0.36
CDK4-215ENST00000553237 AGO2Q9UKV8 859 aaKnown RBP17.27■□□□□ 0.36
CDK4-215ENST00000553237 PCDHB8Q9UN66 801 aa17.27■□□□□ 0.36
CDK4-215ENST00000553237 MORC2Q9Y6X9 1032 aaPredicted RBP17.27■□□□□ 0.36
CDK4-215ENST00000553237 PRRG1O14668 218 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 PPEF2O14830 753 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 SPTLC2O15270 562 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 XPOTO43592 962 aaKnown RBP17.26■□□□□ 0.35
CDK4-215ENST00000553237 GCNT3O95395 438 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 SEC24AO95486 1093 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 ADRB2P07550 413 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 CFHP08603 1231 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 NFICP08651 508 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 GAP43P17677 238 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 SPATA1Q5VX52 437 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 SLFN12LQ6IEE8 588 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 ZNF280DQ6N043 979 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 DSTYKQ6XUX3 929 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 FLCNQ8NFG4 579 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 SEL1LQ9UBV2 794 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 CDH7Q9ULB5 785 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 NUMBLQ9Y6R0 609 aa17.26■□□□□ 0.35
CDK4-215ENST00000553237 PPP1R37O75864 691 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 LRG1P02750 347 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 ATF2P15336 505 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
CDK4-215ENST00000553237 HTR4Q13639 388 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 TMEM132DQ14C87 1099 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 PABPC1LQ4VXU2 614 aaKnown RBP17.25■□□□□ 0.35
CDK4-215ENST00000553237 PARM1Q6UWI2 310 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 RTL10Q7L3V2 364 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 ALYREFQ86V81 257 aaKnown RBP17.25■□□□□ 0.35
CDK4-215ENST00000553237 CD302Q8IX05 232 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 SIX5Q8N196 739 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 TMEM105Q8N8V8 129 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 BEST2Q8NFU1 509 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 ING5Q8WYH8 240 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 POMGNT1Q8WZA1 660 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 FGF13Q92913 245 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 NXPE3Q969Y0 559 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 RPP25Q9BUL9 199 aaKnown RBP17.25■□□□□ 0.35
CDK4-215ENST00000553237 STRA6Q9BX79 667 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 STYXL1Q9Y6J8 313 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 DOCK8Q8NF50 2099 aa17.25■□□□□ 0.35
CDK4-215ENST00000553237 ANHXE9PGG2 379 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 M0QZQ0 153 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 POU2F2P09086 479 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 CPB1P15086 417 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 ADSSP30520 456 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 CASP5P51878 434 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 YWHAHQ04917 246 aaPredicted RBP17.24■□□□□ 0.35
CDK4-215ENST00000553237 ADCY1Q08828 1119 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 TCF15Q12870 199 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 ASTLQ6HA08 431 aaPredicted RBP17.24■□□□□ 0.35
CDK4-215ENST00000553237 USP37Q86T82 979 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 HVCN1Q96D96 273 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 ACCSQ96QU6 501 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 PRRX2Q99811 253 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 FGFBP2Q9BYJ0 223 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 PANK4Q9NVE7 773 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 CA14Q9ULX7 337 aa17.24■□□□□ 0.35
CDK4-215ENST00000553237 MRPS23Q9Y3D9 190 aaKnown RBP17.24■□□□□ 0.35
CDK4-215ENST00000553237 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.24■□□□□ 0.35
CDK4-215ENST00000553237 ZFP37Q9Y6Q3 630 aaPredicted RBP17.24■□□□□ 0.35
CDK4-215ENST00000553237 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
CDK4-215ENST00000553237 ARHGEF37A1IGU5 675 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 PPP6R2O75170 966 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 RHOP08100 348 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 OR4Q2P0C623 313 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 SRFP11831 508 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 NPR3P17342 541 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 AARSP49588 968 aaKnown RBP eCLIP17.23■□□□□ 0.35
CDK4-215ENST00000553237 PTPN5P54829 565 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 LILRA4P59901 499 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 POSTNQ15063 836 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms