RNA–Protein interactions for RNA: ENST00000552879.5

LMBR1L-228, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-228ENST00000552879 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.89□□□□□ -0.35
LMBR1L-228ENST00000552879 HSPBP1Q9NZL4 362 aa12.89□□□□□ -0.35
LMBR1L-228ENST00000552879 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
LMBR1L-228ENST00000552879 MTRRQ9UBK8 725 aa12.89□□□□□ -0.35
LMBR1L-228ENST00000552879 VWA8A3KMH1 1905 aa12.89□□□□□ -0.35
LMBR1L-228ENST00000552879 UBE4BO95155 1302 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 M0QZQ0 153 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 PAPLNO95428 1278 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 ADH1AP07327 375 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 HOXB8P17481 243 aaPredicted RBP12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 ZP2Q05996 745 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 PSMD2Q13200 908 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 PPFIBP1Q86W92 1011 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 GPD1LQ8N335 351 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 ADAM7Q9H2U9 754 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 RBAKQ9NYW8 714 aaPredicted RBP12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 C2CD2Q9Y426 696 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 CITO14578 2027 aa12.88□□□□□ -0.35
LMBR1L-228ENST00000552879 IL18RAPO95256 599 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 C1RP00736 705 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 LILRA4P59901 499 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 PNOCQ13519 176 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 C12orf56Q8IXR9 622 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 TMEM87AQ8NBN3 555 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 BEST2Q8NFU1 509 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 PLEKHO2Q8TD55 490 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 ERCC4Q92889 916 aaPredicted RBP12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 DMAC2Q9NW81 257 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 DPP3Q9NY33 737 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 TIMM13Q9Y5L4 95 aaPredicted RBP12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 BACE2Q9Y5Z0 518 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 PLXNA3P51805 1871 aa12.87□□□□□ -0.35
LMBR1L-228ENST00000552879 SYN3O14994 580 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 KIAA0391O15091 583 aaKnown RBP12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 TRAPPC3O43617 180 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 RFPL2O75678 378 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 GLUD1P00367 558 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 SRGAP2BP0DMP2 458 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 MCM4P33991 863 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 OR1D2P34982 312 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 ANP32AP39687 249 aaKnown RBP12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 SNRPFP62306 86 aaKnown RBP12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 RAB33AQ14088 237 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 KCNB1Q14721 858 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 SLC8B1Q6J4K2 584 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 TMC5Q6UXY8 1006 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 ADHFE1Q8IWW8 467 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 OR5B17Q8NGF7 314 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 ZNF707Q96C28 371 aaPredicted RBP12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 POMKQ9H5K3 350 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 PRKAG3Q9UGI9 489 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 FBXL5Q9UKA1 691 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 FBXW11Q9UKB1 542 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 CDY1Q9Y6F8 540 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 ANK1P16157 1881 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 CUL9Q8IWT3 2517 aa12.86□□□□□ -0.35
LMBR1L-228ENST00000552879 BDP1A6H8Y1 2624 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 LOC730098B7Z3J9 87 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 TNFRSF10AO00220 468 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 OAZ2O95190 189 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 CYP2J2P51589 502 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 CREMQ03060 361 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 ITIH3Q06033 890 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 ANKS3Q6ZW76 656 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 GPR149Q86SP6 731 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 NT5DC4Q86YG4 428 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 GJD3Q8N144 294 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 XXYLT1Q8NBI6 393 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 CMASQ8NFW8 434 aaPredicted RBP12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 HDAC7Q8WUI4 952 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 TMEM174Q8WUU8 243 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
LMBR1L-228ENST00000552879 SENP8Q96LD8 212 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms