RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ANKFY1Q9P2R3 1169 aa12.4□□□□□ -0.42
TMEM116-218ENST00000552839 DMXL1Q9Y485 3027 aa12.4□□□□□ -0.43
TMEM116-218ENST00000552839 PATJQ8NI35 1801 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 EIF3DO15371 548 aaKnown RBP eCLIP12.39□□□□□ -0.43
TMEM116-218ENST00000552839 KRT37O76014 449 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 PRPF6O94906 941 aaKnown RBP12.39□□□□□ -0.43
TMEM116-218ENST00000552839 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 GLUD1P00367 558 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 SPATA31D3P0C874 917 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 LAMP2P13473 410 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 AXLP30530 894 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 PPP1R2P41236 205 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 ZNF568Q3ZCX4 644 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 UBXN11Q5T124 520 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-218ENST00000552839 KIAA0319Q5VV43 1072 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 SPATA31D4Q6ZUB0 917 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-218ENST00000552839 MAML2Q8IZL2 1156 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-218ENST00000552839 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 SUMF1Q8NBK3 374 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 TMEM161BQ8NDZ6 487 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-218ENST00000552839 CCDC51Q96ER9 411 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 CNTNAP3BQ96NU0 1288 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 CNTNAP3Q9BZ76 1288 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 RXFP1Q9HBX9 757 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 MAN1B1Q9UKM7 699 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
TMEM116-218ENST00000552839 PRG3Q9Y2Y8 225 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-218ENST00000552839 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 ANHXE9PGG2 379 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 ACKR2O00590 384 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 PSMA7O14818 248 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 KLRC4O43908 158 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 TSPAN1O60635 241 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 LRRN2O75325 713 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 PAPLNO95428 1278 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 EFEMP2O95967 443 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 HOXA11P31270 313 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-218ENST00000552839 GLUD2P49448 558 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 HTR4Q13639 388 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-218ENST00000552839 RSPO4Q2I0M5 234 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-218ENST00000552839 ZC2HC1CQ53FD0 456 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-218ENST00000552839 ATF7IP2Q5U623 682 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 KLHL10Q6JEL2 608 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 DCLRE1AQ6PJP8 1040 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 ZNF720Q7Z2F6 126 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 MAP4K3Q8IVH8 894 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 PJA1Q8NG27 643 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 FOXQ1Q9C009 403 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 MINDY3Q9H8M7 445 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 PIDD1Q9HB75 910 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 SLC2A4RGQ9NR83 387 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.38□□□□□ -0.43
TMEM116-218ENST00000552839 DPP7Q9UHL4 492 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 GDAQ9Y2T3 454 aa12.38□□□□□ -0.43
TMEM116-218ENST00000552839 CACNA1BQ00975 2339 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 ZNF292O60281 2723 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 F8W810 466 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 CALUO43852 315 aaPredicted RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 OR1G1P47890 313 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 STARD6P59095 220 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 GTF2BQ00403 316 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 DSG1Q02413 1049 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 STK4Q13043 487 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 STX1AQ16623 288 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 TPD52L1Q16890 204 aaPredicted RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 DCAF4L1Q3SXM0 396 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 ARMCX5Q6P1M9 558 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 ELMSAN1Q6PJG2 1045 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 GET4Q7L5D6 327 aaPredicted RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 SMG8Q8ND04 991 aaKnown RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 HDAC7Q8WUI4 952 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 POMGNT1Q8WZA1 660 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 NTPCRQ9BSD7 190 aaKnown RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 RPP25Q9BUL9 199 aaKnown RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 TARS2Q9BW92 718 aaKnown RBP12.37□□□□□ -0.43
TMEM116-218ENST00000552839 CCDC113Q9H0I3 377 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 PLEKHA4Q9H4M7 779 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 MIOSQ9NXC5 875 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 MAPK8IP1Q9UQF2 711 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 NUMBLQ9Y6R0 609 aa12.37□□□□□ -0.43
TMEM116-218ENST00000552839 BICDL2A1A5D9 508 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 CLDN3O15551 220 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms