RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SNTG2Q9NY99 539 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 PCDHA4Q9UN74 947 aa12.56□□□□□ -0.4
SUPT16H-202ENST00000552829 HELZ2Q9BYK8 2649 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 TAF4O00268 1085 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 EXTL3O43909 919 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 RPP40O75818 363 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 AKAP3O75969 853 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 RECQL4O94761 1208 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 LYPLA2O95372 231 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 TOP3BO95985 862 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 CTHP32929 405 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 SOX9P48436 509 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 NOVA1P51513 510 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 AKAP17AQ02040 695 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 FCHO2Q0JRZ9 810 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 MRPL58Q14197 206 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 RNF43Q68DV7 783 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 RALGPS2Q86X27 583 aaPredicted RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 FBXL16Q8N461 479 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 DAGLBQ8NCG7 672 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 C3orf58Q8NDZ4 430 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 ZSCAN18Q8TBC5 510 aaPredicted RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 E2F7Q96AV8 911 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 DYDC2Q96IM9 177 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 PRIMPOLQ96LW4 560 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 PPP1R10Q96QC0 940 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 FZD8Q9H461 694 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 VPS45Q9NRW7 570 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 CEP72Q9P209 647 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 INSL5Q9Y5Q6 135 aa12.55□□□□□ -0.4
SUPT16H-202ENST00000552829 ADAMTS20P59510 1910 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 SLC38A8A6NNN8 435 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 SPECC1L-ADORA2AF8WAN1 911 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 PRRG1O14668 218 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 PPP1R37O75864 691 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 DGAT1O75907 488 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 B3GAT3O94766 335 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 SLITRK3O94933 977 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 SPINK2P20155 84 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 ELF1P32519 619 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 MPLP40238 635 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 ZNF252P-AS1Q0IIN9 211 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 CTTNQ14247 550 aaKnown RBP12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 UPP1Q16831 310 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 CYP4A22Q5TCH4 519 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 TCEAL6Q6IPX3 200 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 PKN3Q6P5Z2 889 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 CSGALNACT1Q8TDX6 532 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 TCEAL3Q969E4 200 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 LRRC3BQ96PB8 259 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 LRRC3Q9BY71 257 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 AGXT2Q9BYV1 514 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 PDZD7Q9H5P4 517 aa12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 PRMT7Q9NVM4 692 aaPredicted RBP12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 NUP210Q8TEM1 1887 aaPredicted RBP12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 ASH1LQ9NR48 2969 aaKnown RBP12.54□□□□□ -0.4
SUPT16H-202ENST00000552829 PI4KAP42356 2102 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 GON4LQ3T8J9 2241 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 I3L4J1 428 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 N4BP3O15049 544 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 TBX3O15119 743 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 TRAPPC3O43617 180 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 CPA1P15085 419 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 GJA1P17302 382 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 BRCC3P46736 316 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 CLCNKBP51801 687 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 FOXC1Q12948 553 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 INF2Q27J81 1249 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 PLK5Q496M5 336 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 TPGS2Q68CL5 300 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 LEMD2Q8NC56 503 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 BRF1Q92994 677 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 HSD17B14Q9BPX1 270 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 GPR88Q9GZN0 384 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 CYP4F11Q9HBI6 524 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 ANKEF1Q9NU02 776 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 FREM2Q5SZK8 3169 aa12.53□□□□□ -0.4
SUPT16H-202ENST00000552829 C4orf47A7E2U8 309 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 CEACAM1P13688 526 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 CSRP1P21291 193 aaKnown RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 PXNP49023 591 aaPredicted RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 KPNA1P52294 538 aaPredicted RBP12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 EVCP57679 992 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 CYP4A11Q02928 519 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 KRT32Q14532 448 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 PON2Q15165 354 aa12.52□□□□□ -0.41
SUPT16H-202ENST00000552829 TEAD2Q15562 447 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms