RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SLFN13Q68D06 897 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC6A19Q695T7 634 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 DPY19L2P1Q6NXN4 242 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 CDC42EP5Q6NZY7 148 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 FDX2Q6P4F2 183 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 IGF2-ASQ6U949 168 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 KDM7AQ6ZMT4 941 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 PTF1AQ7RTS3 328 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 SLFN11Q7Z7L1 901 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 HID1Q8IV36 788 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 NELFCDQ8IXH7 590 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 FAM178BQ8IXR5 827 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 GSPT2Q8IYD1 628 aaKnown RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 NLGN1Q8N2Q7 840 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 ARFGAP2Q8N6H7 521 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 ANKRD13CQ8N6S4 541 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 USP38Q8NB14 1042 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 SMG8Q8ND04 991 aaKnown RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 C3orf20Q8ND61 904 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 CRYGNQ8WXF5 182 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 RIN2Q8WYP3 895 aaPredicted RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 TRIM11Q96F44 468 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 GDAP1L1Q96MZ0 367 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 INPP4AQ96PE3 977 aaPredicted RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 ZIM3Q96PE6 472 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 SPAG5Q96R06 1193 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 PAGR1Q9BTK6 254 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 AMNQ9BXJ7 453 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 ISCUQ9H1K1 167 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 DDX4Q9NQI0 724 aaKnown RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 TYW1Q9NV66 732 aaKnown RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 SUCLA2Q9P2R7 463 aaPredicted RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 LCMT1Q9UIC8 334 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 PPP1R9AQ9ULJ8 1098 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 TTC7AQ9ULT0 858 aaPredicted RBP6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 SYNPO2Q9UMS6 1093 aa6.49□□□□□ -1.37
CHMP4A-210ENST00000552620 ATAD5Q96QE3 1844 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 GOLGA6L10A6NI86 522 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MPHOSPH10O00566 681 aaKnown RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MEIS2O14770 477 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 EIF3DO15371 548 aaKnown RBP eCLIP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MED24O75448 989 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 WISP1O95388 367 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 GJB6O95452 261 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 EYA4O95677 639 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 H2AFZP0C0S5 128 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 GYS1P13807 737 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 UCHL3P15374 230 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 HSD3B2P26439 372 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 PON1P27169 355 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC16A2P36021 539 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 SREBF1P36956 1147 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 STAT1P42224 750 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 NOP2P46087 812 aaKnown RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 CARSP49589 748 aaKnown RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 SOX4Q06945 474 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 BIRC3Q13489 604 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 PICALMQ13492 652 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MYBPC2Q14324 1141 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 EPHA7Q15375 998 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC15A2Q16348 729 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MTERF2Q49AM1 385 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 TTC31Q49AM3 519 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 TTMPQ5BVD1 217 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 SPDYCQ5MJ68 293 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 ALKBH5Q6P6C2 394 aaKnown RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 C6orf15Q6UXA7 325 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 UNC5AQ6ZN44 842 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 STXBP4Q6ZWJ1 553 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 H2AFVQ71UI9 128 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 ZNF571Q7Z3V5 609 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MAATS1Q7Z4T9 603 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 AMIGO3Q86WK7 504 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 CATSPER3Q86XQ3 398 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MCATQ8IVS2 390 aaKnown RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MRPL41Q8IXM3 137 aaKnown RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 RASGEF1CQ8N431 466 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 FAM133AQ8N9E0 248 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 GMCL1P1Q8NEA9 526 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 CCDC26Q8TAB7 109 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 ETNPPLQ8TBG4 499 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 BCAS4Q8TDM0 211 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 CASKIN2Q8WXE0 1202 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 IFT81Q8WYA0 676 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 TEKT1Q969V4 418 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 ARL8AQ96BM9 186 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 ACSF2Q96CM8 615 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 MS4A14Q96JA4 679 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 KRT12Q99456 494 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 TMX4Q9H1E5 349 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 TAF1DQ9H5J8 278 aaPredicted RBP6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 SLITRK6Q9H5Y7 841 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 TUFT1Q9NNX1 390 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 TBC1D7Q9P0N9 293 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 PI4KBQ9UBF8 816 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 NFU1Q9UMS0 254 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 NENFQ9UMX5 172 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 STXBP5LQ9Y2K9 1186 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms