RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 BRWD1Q9NSI6 2320 aa17.71■□□□□ 0.43
GCN1-209ENST00000551920 TRIM49BA6NDI0 452 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 PPP1R3GB7ZBB8 358 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 TULP1O00294 542 aaPredicted RBP17.7■□□□□ 0.42
GCN1-209ENST00000551920 PIRO00625 290 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 TEX28O15482 410 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 CALUO43852 315 aaPredicted RBP17.7■□□□□ 0.42
GCN1-209ENST00000551920 CLASP2O75122 1294 aaKnown RBP17.7■□□□□ 0.42
GCN1-209ENST00000551920 AKAP3O75969 853 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 RPL17P18621 184 aaKnown RBP17.7■□□□□ 0.42
GCN1-209ENST00000551920 NR2F2P24468 414 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 MCM4P33991 863 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 ELAVL2Q12926 359 aaKnown RBP17.7■□□□□ 0.42
GCN1-209ENST00000551920 MYBPC2Q14324 1141 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 CENPPQ6IPU0 288 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
GCN1-209ENST00000551920 NT5DC4Q86YG4 428 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 PIK3R5Q8WYR1 880 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 PPP2R3CQ969Q6 453 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 CCDC127Q96BQ5 260 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 EEF2KMTQ96G04 330 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 SUSD3Q96L08 255 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 KLHL5Q96PQ7 755 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 POP1Q99575 1024 aaKnown RBP17.7■□□□□ 0.42
GCN1-209ENST00000551920 NUP62CLQ9H1M0 184 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 RXFP1Q9HBX9 757 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 INTS13Q9NVM9 706 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 CLDND1Q9NY35 253 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 SIX4Q9UIU6 781 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
GCN1-209ENST00000551920 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
GCN1-209ENST00000551920 GOLGA6L22H0YM25 854 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 ADAM12O43184 909 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 ITGB3P05106 788 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 DLATP10515 647 aaKnown RBP17.69■□□□□ 0.42
GCN1-209ENST00000551920 POLR2BP30876 1174 aaKnown RBP17.69■□□□□ 0.42
GCN1-209ENST00000551920 ADAM15Q13444 863 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 EDRF1Q3B7T1 1238 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 CEP135Q66GS9 1140 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 KIAA1841Q6NSI8 718 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 CEP57Q86XR8 500 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 WDR49Q8IV35 697 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 ZC3H3Q8IXZ2 948 aaKnown RBP17.69■□□□□ 0.42
GCN1-209ENST00000551920 LNX1Q8TBB1 728 aaPredicted RBP17.69■□□□□ 0.42
GCN1-209ENST00000551920 HLA-CQ95604 372 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 CDCA3Q99618 268 aaPredicted RBP17.69■□□□□ 0.42
GCN1-209ENST00000551920 CGRRF1Q99675 332 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 CLEC1BQ9P126 229 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 THEGQ9P2T0 379 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 BARX2Q9UMQ3 279 aaPredicted RBP17.69■□□□□ 0.42
GCN1-209ENST00000551920 HCFC2Q9Y5Z7 792 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 A0A0C4DFX4 3053 aa17.69■□□□□ 0.42
GCN1-209ENST00000551920 TSC2P49815 1807 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 LRRIQ3A6PVS8 624 aaPredicted RBP17.68■□□□□ 0.42
GCN1-209ENST00000551920 H3BQ06 376 aaPredicted RBP17.68■□□□□ 0.42
GCN1-209ENST00000551920 M0QZQ0 153 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 KCNA5P22460 613 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 LILRA4P59901 499 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 DLG4P78352 724 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 C1orf220Q5T0J3 134 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 LLGL2Q6P1M3 1020 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 RSPO2Q6UXX9 243 aaPredicted RBP17.68■□□□□ 0.42
GCN1-209ENST00000551920 GPR65Q8IYL9 337 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 SLC22A17Q8WUG5 538 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 ZNF516Q92618 1163 aa17.68■□□□□ 0.42
GCN1-209ENST00000551920 GTPBP4Q9BZE4 634 aaKnown RBP17.68■□□□□ 0.42
GCN1-209ENST00000551920 VCANP13611 3396 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 TRAPPC3O43617 180 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 TMEM191BP0C7N4 346 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 EPCAMP16422 314 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 CLCN4P51793 760 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 CLDN10P78369 228 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 BMS1Q14692 1282 aaKnown RBP17.67■□□□□ 0.42
GCN1-209ENST00000551920 SURF1Q15526 300 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 PSMD5Q16401 504 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 VARS2Q5ST30 1063 aaKnown RBP17.67■□□□□ 0.42
GCN1-209ENST00000551920 KLHL10Q6JEL2 608 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 TTI2Q6NXR4 508 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 TRIML1Q8N9V2 468 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 FEZF2Q8TBJ5 459 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 PARD3BQ8TEW8 1205 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 BORCS6Q96GS4 357 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 MTRRQ9UBK8 725 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 ITGA11Q9UKX5 1188 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 PCDHB8Q9UN66 801 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 CTNND2Q9UQB3 1225 aa17.67■□□□□ 0.42
GCN1-209ENST00000551920 PSMA7O14818 248 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 SYN3O14994 580 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 NCK2O43639 380 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 CCNE1P24864 410 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 NDUFV1P49821 464 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 LRRC63Q05C16 580 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 ADAM9Q13443 819 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 TMEM184AQ6ZMB5 413 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 EP400NLQ6ZTU2 488 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 GLYCTKQ8IVS8 523 aa17.66■□□□□ 0.42
GCN1-209ENST00000551920 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.66■□□□□ 0.42
GCN1-209ENST00000551920 CSGALNACT2Q8N6G5 542 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms