RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 DACH1Q9UI36 760 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 ITGA11Q9UKX5 1188 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 PCDHGC5Q9Y5F6 944 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 PTPRJQ12913 1337 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 PIRO00625 290 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 CXCL14O95715 111 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 ITGB3P05106 788 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 URODP06132 367 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 KRT13P13646 458 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 CA8P35219 290 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 BRCC3P46736 316 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 GLUD2P49448 558 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 STX17P56962 302 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 FAM171A1Q5VUB5 890 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 CSGALNACT2Q8N6G5 542 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 MRPL43Q8N983 215 aaKnown RBP20.16■□□□□ 0.82
DDX54-209ENST00000551912 PLEKHO2Q8TD55 490 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 TMC2Q8TDI7 906 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 FAM84AQ96KN4 292 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 CEP63Q96MT8 703 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 DUSP9Q99956 384 aaKnown RBP20.16■□□□□ 0.82
DDX54-209ENST00000551912 GZF1Q9H116 711 aaPredicted RBP20.16■□□□□ 0.82
DDX54-209ENST00000551912 MRPL17Q9NRX2 175 aaKnown RBP20.16■□□□□ 0.82
DDX54-209ENST00000551912 CHST7Q9NS84 486 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 RWDD2AQ9UIY3 292 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 SSX2IPQ9Y2D8 614 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 EYSQ5T1H1 3165 aa20.16■□□□□ 0.82
DDX54-209ENST00000551912 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.15■□□□□ 0.82
DDX54-209ENST00000551912 LRRIQ3A6PVS8 624 aaPredicted RBP20.15■□□□□ 0.82
DDX54-209ENST00000551912 PPEF2O14830 753 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 SLC16A3O15427 465 aaKnown RBP20.15■□□□□ 0.82
DDX54-209ENST00000551912 PAX3P23760 479 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 POLR2BP30876 1174 aaKnown RBP20.15■□□□□ 0.82
DDX54-209ENST00000551912 VAMP7P51809 220 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 AP3M2P53677 418 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 CLDN10P78369 228 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 ENPEPQ07075 957 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 TCEAL5Q5H9L2 206 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 SASS6Q6UVJ0 657 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.15■□□□□ 0.82
DDX54-209ENST00000551912 AUTS2Q8WXX7 1259 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 B3GALT6Q96L58 329 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 TTPALQ9BTX7 342 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 R3HCC1Q9Y3T6 440 aaKnown RBP20.15■□□□□ 0.82
DDX54-209ENST00000551912 IRAK3Q9Y616 596 aa20.15■□□□□ 0.82
DDX54-209ENST00000551912 ATG2AQ2TAZ0 1938 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 C2orf71A6NGG8 1288 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 HIDE1A8MVS5 230 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 I3L4J1 428 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 C2CD2LO14523 706 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 KRT19P08727 400 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 PNPLA4P41247 253 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 LILRA4P59901 499 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 RBP5P82980 135 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 DSG1Q02413 1049 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 BFSP1Q12934 665 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 PTPN14Q15678 1187 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 CCDC85BQ15834 202 aaPredicted RBP20.14■□□□□ 0.81
DDX54-209ENST00000551912 KIAA0319Q5VV43 1072 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 TRAPPC11Q7Z392 1133 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 CEP57Q86XR8 500 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 GPR65Q8IYL9 337 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 MAFAQ8NHW3 353 aaPredicted RBP20.14■□□□□ 0.81
DDX54-209ENST00000551912 ZNF516Q92618 1163 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 SUSD3Q96L08 255 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 ZNF560Q96MR9 790 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 SIX4Q9UIU6 781 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 AGAP1Q9UPQ3 857 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 REV3LO60673 3130 aa20.14■□□□□ 0.81
DDX54-209ENST00000551912 IKBKBO14920 756 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 SYN3O14994 580 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 FGFR3P22607 806 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 AARSP49588 968 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDX54-209ENST00000551912 TAF6P49848 677 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 DLG4P78352 724 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 SKOR2Q2VWA4 1001 aaPredicted RBP20.13■□□□□ 0.81
DDX54-209ENST00000551912 CT47A1Q5JQC4 288 aaPredicted RBP20.13■□□□□ 0.81
DDX54-209ENST00000551912 RTP2Q5QGT7 225 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 DSTYKQ6XUX3 929 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 FILIP1Q7Z7B0 1213 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 ADGRD2Q7Z7M1 963 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 LRRC52Q8N7C0 313 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 CXorf38Q8TB03 319 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 PPM1EQ8WY54 764 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 RIN2Q8WYP3 895 aaPredicted RBP20.13■□□□□ 0.81
DDX54-209ENST00000551912 BORCS6Q96GS4 357 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 TLE6Q9H808 572 aa20.13■□□□□ 0.81
DDX54-209ENST00000551912 COL6A3P12111 3177 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 M0QZQ0 153 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 LILRB3O75022 631 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 FGFR1OPO95684 399 aaKnown RBP20.12■□□□□ 0.81
DDX54-209ENST00000551912 ERCC5P28715 1186 aaPredicted RBP20.12■□□□□ 0.81
DDX54-209ENST00000551912 TKTP29401 623 aaKnown RBP20.12■□□□□ 0.81
DDX54-209ENST00000551912 STX1AQ16623 288 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 SV2CQ496J9 727 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 PDXDC1Q6P996 788 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 RBM23Q86U06 439 aaKnown RBP20.12■□□□□ 0.81
DDX54-209ENST00000551912 SRRTQ9BXP5 876 aaKnown RBP20.12■□□□□ 0.81
DDX54-209ENST00000551912 EMILIN2Q9BXX0 1053 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms