RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LUC7L2Q9Y383 392 aaKnown RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ALPK3Q96L96 1907 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 MROH5Q6ZUA9 1318 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 PLXNB2O15031 1838 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 DOCK3Q8IZD9 2030 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 SCO2A0A1W2PP80 73 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 KLHL33A6NCF5 533 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 TRIM43BA6NCK2 446 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 TRIM75PA6NK02 468 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 GOLGA6L22H0YM25 854 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ACOT7O00154 380 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CTAGE5O15320 804 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 MAFGO15525 162 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 XPOTO43592 962 aaKnown RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 PRC1O43663 620 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 HYAL3O43820 417 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CTNND1O60716 968 aaKnown RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ADAM23O75077 832 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ADAMTS4O75173 837 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 RFPL1O75677 317 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 FARP2O94887 1054 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 APOL3O95236 402 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 EFEMP2O95967 443 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 SCGB1D2O95969 90 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 GLI1P08151 1106 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 RBP3P10745 1247 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 SDHBP21912 280 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 RECQLP46063 649 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 GPR3P46089 330 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 RGS3P49796 1198 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 GP2P55259 537 aaKnown RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 NKX3-2P78367 333 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 KRT85P78386 507 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 GABPAQ06546 454 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CACNB2Q08289 660 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 PDCD1Q15116 288 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 PCBP2Q15366 365 aaKnown RBP eCLIP2.88□□□□□ -1.952e-15■□□□□ 9.5
CPSF6-207ENST00000551516 SEC23AQ15436 765 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 KCNMB1Q16558 191 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CCL14Q16627 93 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 UGT8Q16880 541 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CATSPEREQ5SY80 951 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 OTUD7BQ6GQQ9 843 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ESRP1Q6NXG1 681 aaKnown RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 TATDN1Q6P1N9 297 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ETV3LQ6ZN32 361 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 NBPF11Q86T75 865 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ZC3H18Q86VM9 953 aaKnown RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 MIB1Q86YT6 1006 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 IRF2BP1Q8IU81 584 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CCAR1Q8IX12 1150 aaKnown RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 FAM126BQ8IXS8 530 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CBARPQ8N350 705 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 USP38Q8NB14 1042 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 SLC17A8Q8NDX2 589 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 WDR48Q8TAF3 677 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 CALML6Q8TD86 181 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 TBC1D22AQ8WUA7 517 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 JPH3Q8WXH2 748 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ASB15Q8WXK1 588 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 SSH1Q8WYL5 1049 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 TEKT1Q969V4 418 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 RELTQ969Z4 430 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 FERMT2Q96AC1 680 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 TRIM43Q96BQ3 446 aaPredicted RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 NSUN4Q96CB9 384 aaKnown RBP2.88□□□□□ -1.95
CPSF6-207ENST00000551516 MAML3Q96JK9 1138 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 C12orf42Q96LP6 360 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 DEFB118Q96PH6 123 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ZNF341Q9BYN7 854 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.88□□□□□ -1.952e-6■■■□□ 15.6
CPSF6-207ENST00000551516 PORCNQ9H237 461 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 VEZTQ9HBM0 779 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 KLHL14Q9P2G3 628 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ADAMTS5Q9UNA0 930 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 GIT1Q9Y2X7 761 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 ZHX2Q9Y6X8 837 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 MYPNQ86TC9 1320 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 RPTORQ8N122 1335 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 DCHS1Q96JQ0 3298 aa2.88□□□□□ -1.95
CPSF6-207ENST00000551516 USP34Q70CQ2 3546 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PHIPQ8WWQ0 1821 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 A0A1W2PRG0 241 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 SMIM22K7EJ46 135 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PRPF6O94906 941 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ABLIM3O94929 683 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 LRG1P02750 347 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 MMEP08473 750 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CYBAP13498 195 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 NCAM1P13591 858 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 MTHFD2P13995 350 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 PTGS1P23219 599 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 AOAHP28039 575 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CCND3P30281 292 aaPredicted RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CYP2C19P33261 490 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 TIMM10P62072 90 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ALDH6A1Q02252 535 aaKnown RBP2.87□□□□□ -1.95
CPSF6-207ENST00000551516 ROM1Q03395 351 aa2.87□□□□□ -1.95
CPSF6-207ENST00000551516 CALD1Q05682 793 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms