RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 C1orf127Q8N9H9 656 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 MLKLQ8NB16 471 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 FNBP1Q96RU3 617 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 HERC2P3Q9BVR0 1158 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 NSUN3Q9H649 340 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 IGFLR1Q9H665 355 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 TLE6Q9H808 572 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 NGRNQ9NPE2 291 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 SIX4Q9UIU6 781 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 AGAP1Q9UPQ3 857 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 NUB1Q9Y5A7 615 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 TRANK1O15050 2925 aa16.39■□□□□ 0.21
SMARCD1-211ENST00000551497 SCN1AP35498 2009 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 LRRIQ3A6PVS8 624 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 ITGB3P05106 788 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 PSMC2P35998 433 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 NRIP1P48552 1158 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 LILRA4P59901 499 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 FKBP3Q00688 224 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 LRRC63Q05C16 580 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 HYAL1Q12794 435 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 PAK1Q13153 545 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 USP41Q3LFD5 358 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 RTP2Q5QGT7 225 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 C1orf220Q5T0J3 134 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 CCDC183Q5T5S1 534 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 KIAA1841Q6NSI8 718 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 CAVIN1Q6NZI2 390 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 WDR49Q8IV35 697 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 ZC3H3Q8IXZ2 948 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 RIN2Q8WYP3 895 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 BORCS6Q96GS4 357 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 CGRRF1Q99675 332 aa16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 MRPL17Q9NRX2 175 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 SF3B1O75533 1304 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMARCD1-211ENST00000551497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 CST3P01034 146 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TNNC2P02585 160 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 KRT19P08727 400 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TMEM191BP0C7N4 346 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 FGFR3P22607 806 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TKTP29401 623 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 POLR2BP30876 1174 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 GLUD2P49448 558 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 VAMP7P51809 220 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 CLDN10P78369 228 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 RBM10P98175 930 aaKnown RBP16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 DSG1Q02413 1049 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TMC2Q8TDI7 906 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 ANKRD36BP1Q96IX9 119 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 SUSD3Q96L08 255 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TTPALQ9BTX7 342 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 PRDM6Q9NQX0 595 aa16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 TIMM13Q9Y5L4 95 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-211ENST00000551497 BICDL2A1A5D9 508 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 MAPK13O15264 365 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 LINC01565O15544 149 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 C4BPAP04003 597 aaKnown RBP16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 URODP06132 367 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 CNPP09543 421 aaKnown RBP16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 TRIM49P0CI25 452 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 TRIM49CP0CI26 452 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 RPL17P18621 184 aaKnown RBP16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 RBP5P82980 135 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 ELAVL2Q12926 359 aaKnown RBP16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 BMS1Q14692 1282 aaKnown RBP16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 DUSP6Q16828 381 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 DSTYKQ6XUX3 929 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 LNX1Q8TBB1 728 aaPredicted RBP16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 KLHL5Q96PQ7 755 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 SRRTQ9BXP5 876 aaKnown RBP16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 IRAK3Q9Y616 596 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 CDH23Q9H251 3354 aa16.36■□□□□ 0.21
SMARCD1-211ENST00000551497 TEX28O15482 410 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 ADAM12O43184 909 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 CLASP2O75122 1294 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 KRT13P13646 458 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 AARSP49588 968 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 PPP3CAQ08209 521 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 SKIV2LQ15477 1246 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 INTS8Q75QN2 995 aaKnown RBP16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 FILIP1Q7Z7B0 1213 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 ELMO3Q96BJ8 720 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 SENP8Q96LD8 212 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 MKNK1Q9BUB5 465 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 RXFP1Q9HBX9 757 aa16.35■□□□□ 0.21
SMARCD1-211ENST00000551497 ITGA11Q9UKX5 1188 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms