RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 PTPN18Q99952 460 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 ZSWIM1Q9BR11 485 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 NUP85Q9BW27 656 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 MTMR12Q9C0I1 747 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 RAB17Q9H0T7 212 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 RNPEPQ9H4A4 650 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 PDZD7Q9H5P4 517 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 MED4Q9NPJ6 270 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 CNOT8Q9UFF9 292 aaKnown RBP8.35□□□□□ -1.07
TMEM116-214ENST00000551297 CPA4Q9UI42 421 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 PCDHGC3Q9UN70 934 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 GNEQ9Y223 722 aaKnown RBP8.35□□□□□ -1.07
TMEM116-214ENST00000551297 STXBP5LQ9Y2K9 1186 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
TMEM116-214ENST00000551297 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
TMEM116-214ENST00000551297 A0A087WZ62 844 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 MYO1FO00160 1098 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 IGF2BP3O00425 579 aaKnown RBP eCLIP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 KRIT1O00522 736 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 NDC80O14777 642 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 ZNF185O15231 689 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 THAP12O43422 761 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 CA12O43570 354 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 PSTPIP1O43586 416 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 NCK2O43639 380 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 CYP1A1P04798 512 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 MMEP08473 750 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 STAG3L1P0CL83 205 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 SMIM10L2AP0DMW4 78 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 SMIM10L2BP0DMW5 78 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 CYP2C9P11712 490 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 UNGP13051 313 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 CHRNB2P17787 502 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 ACO1P21399 889 aaKnown RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 PSEN2P49810 448 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 VSNL1P62760 191 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 RBP5P82980 135 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 GABPB1Q06547 395 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 DHX34Q14147 1143 aaKnown RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 AMHR2Q16671 573 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 BEND6Q5SZJ8 279 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 CST9Q5W186 159 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 SLC27A1Q6PCB7 646 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 CATSPER4Q7RTX7 472 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 MCOLN2Q8IZK6 566 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 UBR7Q8N806 425 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 BEST2Q8NFU1 509 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 NPLOC4Q8TAT6 608 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 WHAMMQ8TF30 809 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 TRAPPC12Q8WVT3 735 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 ZNF516Q92618 1163 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 USP6NLQ92738 828 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 TATDN2Q93075 761 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 FAM212AQ96EL1 285 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 ZNF560Q96MR9 790 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 RUFY1Q96T51 708 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 FDXACB1Q9BRP7 624 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-214ENST00000551297 HAPLN2Q9GZV7 340 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 IFT122Q9HBG6 1241 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 HOMER3Q9NSC5 361 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 WDR35Q9P2L0 1181 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 KIAA1257Q9ULG3 409 aa8.34□□□□□ -1.07
TMEM116-214ENST00000551297 PTPRJQ12913 1337 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 PASKQ96RG2 1323 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 A0A1B0GUA9 196 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 C17orf102A2RUQ5 167 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 FAM187AA6NFU0 413 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 PDE2AO00408 941 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 TLR3O15455 904 aaKnown RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 DYNC1LI2O43237 492 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 TSPAN1O60635 241 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 DUSP11O75319 330 aaKnown RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 EDN1P05305 212 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 ZNF865P0CJ78 1059 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 CXCL8P10145 99 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 DARSP14868 501 aaKnown RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 CHRNA3P32297 505 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 CDH5P33151 784 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 CTNNA1P35221 906 aaKnown RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 PNPLA4P41247 253 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 TNNT3P45378 269 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 GSCP56915 257 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 RWDD2BP57060 319 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 NOMO3P69849 1222 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 LACTBP83111 547 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 PTP4A2Q12974 167 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 FSCN1Q16658 493 aaKnown RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 ZBTB41Q5SVQ8 909 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 NAA35Q5VZE5 725 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 LMBRD2Q68DH5 695 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-214ENST00000551297 MON1BQ7L1V2 547 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 LRRC52Q8N7C0 313 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 SMC1BQ8NDV3 1235 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 OR5B17Q8NGF7 314 aa8.33□□□□□ -1.08
TMEM116-214ENST00000551297 IPO4Q8TEX9 1081 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms