RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SPATC1LQ9H0A9 340 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 CPVLQ9H3G5 476 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 VAT1LQ9HCJ6 419 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 RNF186Q9NXI6 227 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 MAP3K20Q9NYL2 800 aaKnown RBP6.56□□□□□ -1.36
SCAF11-213ENST00000550629 CLEC1BQ9P126 229 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 BTBD7Q9P203 1132 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 ORC3Q9UBD5 711 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-213ENST00000550629 FBLN5Q9UBX5 448 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 CCPG1Q9ULG6 757 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 SMC3Q9UQE7 1217 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 MRPL11Q9Y3B7 192 aaKnown RBP6.56□□□□□ -1.36
SCAF11-213ENST00000550629 RWDD3Q9Y3V2 267 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 PCDHA1Q9Y5I3 950 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 HCFC2Q9Y5Z7 792 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 IRAK3Q9Y616 596 aa6.56□□□□□ -1.36
SCAF11-213ENST00000550629 PARP14Q460N5 1801 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 PFASO15067 1338 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 TBX1O43435 398 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 SUSD5O60279 629 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 FOXD2O60548 495 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-213ENST00000550629 JAK2O60674 1132 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 CNMDO75829 334 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 PLS3P13797 630 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 FDPSP14324 419 aaKnown RBP6.55□□□□□ -1.36
SCAF11-213ENST00000550629 PI3P19957 117 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 GNA11P29992 359 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 MRPL12P52815 198 aaKnown RBP6.55□□□□□ -1.36
SCAF11-213ENST00000550629 NCKAP1LP55160 1127 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 CYP4F3Q08477 520 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 TRIM29Q14134 588 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 ARHGEF6Q15052 776 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 SV2CQ496J9 727 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 CCDC174Q6PII3 467 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 HEATR3Q7Z4Q2 680 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 HOMER1Q86YM7 354 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 IGDCC3Q8IVU1 814 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 FAM184AQ8NB25 1140 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 BICD2Q8TD16 824 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 HNRNPLLQ8WVV9 542 aaKnown RBP6.55□□□□□ -1.36
SCAF11-213ENST00000550629 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 MOV10L1Q9BXT6 1211 aaKnown RBP6.55□□□□□ -1.36
SCAF11-213ENST00000550629 ZMYND12Q9H0C1 365 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 NKX2-4Q9H2Z4 354 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 RAVER2Q9HCJ3 691 aaKnown RBP6.55□□□□□ -1.36
SCAF11-213ENST00000550629 TXNRD2Q9NNW7 524 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 CYP26B1Q9NR63 512 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 GULP1Q9UBP9 304 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 PCDHA5Q9Y5H7 936 aa6.55□□□□□ -1.36
SCAF11-213ENST00000550629 CEP350Q5VT06 3117 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 TRBV23OR9-2A0A075B6M9 112 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 LOC102724159A0A0B4J2E5 919 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 ZC3H12DA2A288 527 aaKnown RBP6.54□□□□□ -1.36
SCAF11-213ENST00000550629 C7orf72A4D263 438 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 GJB6O95452 261 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 ITGAVP06756 1048 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 THBDP07204 575 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 GLI4P10075 376 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 SYN1P17600 705 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 GJB2P29033 226 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 HSD17B4P51659 736 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 ADCY7P51828 1080 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 NAPAP54920 295 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 ZNF200P98182 395 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-213ENST00000550629 PLS1Q14651 629 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 PWP2Q15269 919 aaKnown RBP6.54□□□□□ -1.36
SCAF11-213ENST00000550629 MBLAC2Q68D91 279 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 CCAR1Q8IX12 1150 aaKnown RBP6.54□□□□□ -1.36
SCAF11-213ENST00000550629 TMEFF1Q8IYR6 380 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 CPXCR1Q8N123 301 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 LZTR1Q8N653 840 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 ANKRD13CQ8N6S4 541 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 CLEC4DQ8WXI8 215 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 CUL5Q93034 780 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 DDX11Q96FC9 970 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 C8orf76Q96K31 380 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 PAGR1Q9BTK6 254 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 PHF20Q9BVI0 1012 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 ACAD9Q9H845 621 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 PSTPIP2Q9H939 334 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 C6orf50Q9HD87 102 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 RIC8AQ9NPQ8 531 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 RNF146Q9NTX7 359 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 CPA4Q9UI42 421 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 PLA2G2DQ9UNK4 145 aa6.54□□□□□ -1.36
SCAF11-213ENST00000550629 hCG_1642624A0A1W2PR95 340 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 SMCO2A6NFE2 343 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 SLC15A5A6NIM6 579 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 GCOM1H8Y6P7 765 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-213ENST00000550629 TRIM13O60858 407 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 FOSP01100 380 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-213ENST00000550629 MMP1P03956 469 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 POLR2MP0CAP2 368 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 FCER1AP12319 257 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 ALAS1P13196 640 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 SNAP25P60880 206 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms