RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 NOTCH4Q99466 2003 aa25.19■■□□□ 1.62
SMARCD1-209ENST00000550477 PP2D1A8MPX8 630 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 MAN2B1O00754 1011 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 XPOTO43592 962 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 SLC5A9Q2M3M2 681 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 DDX12PQ92771 950 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 SECISBP2LQ93073 1101 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 BICD1Q96G01 975 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 TBC1D32Q96NH3 1257 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 BRD9Q9H8M2 597 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 GVINP1Q7Z2Y8 2422 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 MYH11P35749 1972 aa25.18■■□□□ 1.62
SMARCD1-209ENST00000550477 SPTLC1O15269 473 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 TBC1D4O60343 1298 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 LRRN2O75325 713 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 CPB1P15086 417 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 CSTF1Q05048 431 aaKnown RBP25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 ADCY1Q08828 1119 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 MAPK7Q13164 816 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 TANGO2Q6ICL3 276 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 KIAA2013Q8IYS2 634 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 SYT2Q8N9I0 419 aaPredicted RBP25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 IRF7Q92985 503 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 C18orf25Q96B23 403 aaPredicted RBP25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 ZBTB45Q96K62 511 aaPredicted RBP25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 TRMT61BQ9BVS5 477 aaKnown RBP25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 PCDHB8Q9UN66 801 aa25.17■■□□□ 1.62
SMARCD1-209ENST00000550477 CLTAP09496 248 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 CEBPBP17676 345 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 CD72P21854 359 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 SCP2P22307 547 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 RPS9P46781 194 aaKnown RBP25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 RAD51AP2Q09MP3 1159 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 SLC10A6Q3KNW5 377 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 HYIQ5T013 277 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 USP37Q86T82 979 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 TMEM161BQ8NDZ6 487 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 MMTAG2Q9BU76 263 aaKnown RBP25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 GPR88Q9GZN0 384 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 ASAH2Q9NR71 780 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 MTF2Q9Y483 593 aaPredicted RBP25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 PCDHGA2Q9Y5H1 932 aa25.16■■□□□ 1.62
SMARCD1-209ENST00000550477 FANCMQ8IYD8 2048 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 H3BQV1 296 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 ABLIM1O14639 778 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 ATP2C1P98194 919 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 YWHAHQ04917 246 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 PPP2R5DQ14738 602 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 IL17AQ16552 155 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 PRSS36Q5K4E3 855 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 ARL6IP4Q66PJ3 421 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 KCNK18Q7Z418 384 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 CLDN23Q96B33 292 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 TSPAN18Q96SJ8 248 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 HEBP1Q9NRV9 189 aa25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 UBQLN1Q9UMX0 589 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-209ENST00000550477 SEC24AO95486 1093 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 MAPTP10636 758 aaKnown RBP25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 PPP2R3AQ06190 1150 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 MCL1Q07820 350 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 TWF1Q12792 350 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 PLD1Q13393 1074 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 GPR161Q8N6U8 529 aaKnown RBP25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 SMARCD2Q92925 531 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 KIF12Q96FN5 646 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 PLA2G2FQ9BZM2 168 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 ZSCAN32Q9NX65 697 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 NCDNQ9UBB6 729 aa25.14■■□□□ 1.62
SMARCD1-209ENST00000550477 VWA3AA6NCI4 1184 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 SLC26A4O43511 780 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 PLA2G4BP0C869 781 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 PSMC3P17980 439 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 CYP3A5P20815 502 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 LIG4P49917 911 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 FAM78AQ5JUQ0 283 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 DSTYKQ6XUX3 929 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 MAML2Q8IZL2 1156 aaPredicted RBP25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 DEPDC1BQ8WUY9 529 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 E2F7Q96AV8 911 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 CALML4Q96GE6 196 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 ASB16Q96NS5 453 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 PLIN2Q99541 437 aa25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 FAM126AQ9BYI3 521 aaPredicted RBP25.13■■□□□ 1.61
SMARCD1-209ENST00000550477 CXCL8P10145 99 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 MYL4P12829 197 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 TARSP26639 723 aaKnown RBP25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 LRPAP1P30533 357 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 ABCD1P33897 745 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 PUM1Q14671 1186 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 RABEP1Q15276 862 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 SEZ6Q53EL9 994 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 TCEAL4Q96EI5 215 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 AK8Q96MA6 479 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 IER2Q9BTL4 223 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 SLITRK6Q9H5Y7 841 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 TRPV5Q9NQA5 729 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 ODF2LQ9ULJ1 636 aa25.12■■□□□ 1.61
SMARCD1-209ENST00000550477 VPS13AQ96RL7 3174 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 M0QZQ0 153 aa25.11■■□□□ 1.61
SMARCD1-209ENST00000550477 OAZ2O95190 189 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms