RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 DERAQ9Y315 318 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 NUMBLQ9Y6R0 609 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 TRIOO75962 3097 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 I3L4J1 428 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 M0QZQ0 153 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 NARSO43776 548 aaKnown RBP11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 CFHP08603 1231 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 CXCL8P10145 99 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 NPR3P17342 541 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 GAP43P17677 238 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 SYT1P21579 422 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 IGFBP6P24592 240 aaPredicted RBP11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 YWHAHQ04917 246 aaPredicted RBP11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 PTPAQ15257 358 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 CYP4A22Q5TCH4 519 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 RRAGBQ5VZM2 374 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 IQCEQ6IPM2 695 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 RSPO2Q6UXX9 243 aaPredicted RBP11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 CCDC73Q6ZRK6 1079 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 SV2BQ7L1I2 683 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 ZNF720Q7Z2F6 126 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 MAP4K3Q8IVH8 894 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 BEST2Q8NFU1 509 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 ZNF512Q96ME7 567 aaPredicted RBP11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 ASB7Q9H672 318 aa11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 DNMT3BQ9UBC3 853 aaKnown RBP11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 AFF4Q9UHB7 1163 aaKnown RBP11.83□□□□□ -0.52
VTI1BP3-201ENST00000550220 WDR27A2RRH5 827 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 OR6C75A6NL08 312 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 LACTBL1A8MY62 500 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 PROB1E7EW31 1015 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 H0Y858 1186 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 ECI2O75521 394 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 RHOP08100 348 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 TYMPP19971 482 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 AARSP49588 968 aaKnown RBP eCLIP11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 ARPP19P56211 112 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 NTHL1P78549 312 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 GRIN1Q05586 938 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 PLD1Q13393 1074 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 SEZ6Q53EL9 994 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 CWF19L1Q69YN2 538 aaKnown RBP11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 ADALQ6DHV7 355 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 NT5DC4Q86YG4 428 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 CCDC105Q8IYK2 499 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 GPR152Q8TDT2 470 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 EPSTI1Q96J88 318 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 BACH2Q9BYV9 841 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 LRRC27Q9C0I9 530 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 ARHGEF3Q9NR81 526 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 FBXO2Q9UK22 296 aaPredicted RBP11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 CLIC4Q9Y696 253 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 STYXL1Q9Y6J8 313 aa11.82□□□□□ -0.52
VTI1BP3-201ENST00000550220 K7ELQ4 463 aaPredicted RBP11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 FAM189A1O60320 539 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 PRKCQQ04759 706 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 ADCY1Q08828 1119 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 RESTQ13127 1097 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 ALCAMQ13740 583 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 SLC39A14Q15043 492 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 ARMCX5Q6P1M9 558 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 PARM1Q6UWI2 310 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 PDZD4Q76G19 769 aaPredicted RBP11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 NPAS3Q8IXF0 933 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 DTWD2Q8NBA8 298 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 ITFG1Q8TB96 612 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 FGF14Q92915 247 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 FIZ1Q96SL8 496 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 NELL2Q99435 816 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 GPR88Q9GZN0 384 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 HAPLN2Q9GZV7 340 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 TBC1D17Q9HA65 648 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 HSFX1Q9UBD0 423 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 AGO2Q9UKV8 859 aaKnown RBP11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 DSEQ9UL01 958 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 SIT1Q9Y3P8 196 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 C2CD2Q9Y426 696 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 INSL5Q9Y5Q6 135 aa11.81□□□□□ -0.52
VTI1BP3-201ENST00000550220 KRBA1A5PL33 1030 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 STX6O43752 255 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 LDHAP00338 332 aaKnown RBP11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 CPB1P15086 417 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 NMT1P30419 496 aaKnown RBP11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 NBL1P41271 181 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 TNFSF9P41273 254 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 STARD6P59095 220 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 LILRA4P59901 499 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 GPC5P78333 572 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 SMARCB1Q12824 385 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 GPR17Q13304 367 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 MYBPC2Q14324 1141 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 TMEM132DQ14C87 1099 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms