RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 LINC01565O15544 149 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 TRAPPC3O43617 180 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 CLASP2O75122 1294 aaKnown RBP24.36■■□□□ 1.49
BRF1-216ENST00000550208 DLATP10515 647 aaKnown RBP24.36■■□□□ 1.49
BRF1-216ENST00000550208 FGFR3P22607 806 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 CCNE1P24864 410 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 KLHL10Q6JEL2 608 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 PRSS55Q6UWB4 352 aaPredicted RBP24.36■■□□□ 1.49
BRF1-216ENST00000550208 C1orf127Q8N9H9 656 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 ZNF516Q92618 1163 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 EEF2KMTQ96G04 330 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 KLHL5Q96PQ7 755 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 FNBP1Q96RU3 617 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 TTPALQ9BTX7 342 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 SSX2IPQ9Y2D8 614 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 FRMD4BQ9Y2L6 1034 aa24.36■■□□□ 1.49
BRF1-216ENST00000550208 PSMA7O14818 248 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 AKAP3O75969 853 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 CNPP09543 421 aaKnown RBP24.35■■□□□ 1.49
BRF1-216ENST00000550208 TNNI1P19237 187 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 TKTP29401 623 aaKnown RBP24.35■■□□□ 1.49
BRF1-216ENST00000550208 ADAM15Q13444 863 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 DUOXA2Q1HG44 320 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.35■■□□□ 1.49
BRF1-216ENST00000550208 WDR49Q8IV35 697 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 CSGALNACT2Q8N6G5 542 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 LNX1Q8TBB1 728 aaPredicted RBP24.35■■□□□ 1.49
BRF1-216ENST00000550208 PARD3BQ8TEW8 1205 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 SUSD3Q96L08 255 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 CGRRF1Q99675 332 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 TSG101Q99816 390 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 MTMR12Q9C0I1 747 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 RXFP1Q9HBX9 757 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 AGAP1Q9UPQ3 857 aa24.35■■□□□ 1.49
BRF1-216ENST00000550208 SPTLC1O15269 473 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 ITGB3P05106 788 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 TMEM191BP0C7N4 346 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 PPP1R2P41236 205 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 LILRA4P59901 499 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 RBM10P98175 930 aaKnown RBP24.34■■□□□ 1.49
BRF1-216ENST00000550208 CTC1Q2NKJ3 1217 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 EP400NLQ6ZTU2 488 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 EFHBQ8N7U6 833 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 CXorf38Q8TB03 319 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 NELFBQ8WX92 580 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 ANKRD36BP1Q96IX9 119 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 CDCA3Q99618 268 aaPredicted RBP24.34■■□□□ 1.49
BRF1-216ENST00000550208 CLDND1Q9NY35 253 aa24.34■■□□□ 1.49
BRF1-216ENST00000550208 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.33■■□□□ 1.49
BRF1-216ENST00000550208 CETN3O15182 167 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 NCK2O43639 380 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 MBD3O95983 291 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 TNNC2P02585 160 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 POLR2BP30876 1174 aaKnown RBP24.33■■□□□ 1.49
BRF1-216ENST00000550208 PSMC2P35998 433 aaKnown RBP24.33■■□□□ 1.49
BRF1-216ENST00000550208 DLG4P78352 724 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 COL19A1Q14993 1142 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 DSTYKQ6XUX3 929 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 GPR65Q8IYL9 337 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 PABPC5Q96DU9 382 aaKnown RBP24.33■■□□□ 1.49
BRF1-216ENST00000550208 EMILIN2Q9BXX0 1053 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 SIX4Q9UIU6 781 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 CTNND2Q9UQB3 1225 aa24.33■■□□□ 1.49
BRF1-216ENST00000550208 M0QZQ0 153 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 MAPK13O15264 365 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 TEX28O15482 410 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 KRT19P08727 400 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 RPL17P18621 184 aaKnown RBP24.32■■□□□ 1.48
BRF1-216ENST00000550208 KLRC2P26717 231 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 LTBRP36941 435 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 AARSP49588 968 aaKnown RBP eCLIP24.32■■□□□ 1.48
BRF1-216ENST00000550208 STX17P56962 302 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 RBP5P82980 135 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 LRRC63Q05C16 580 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 LLGL2Q6P1M3 1020 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 TRAPPC11Q7Z392 1133 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 FAM186BQ8IYM0 893 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 VN1R2Q8NFZ6 395 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 PIK3R5Q8WYR1 880 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 HLA-CQ95604 372 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 BORCS6Q96GS4 357 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 DUSP9Q99956 384 aaKnown RBP24.32■■□□□ 1.48
BRF1-216ENST00000550208 ITGA11Q9UKX5 1188 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 PCDHB8Q9UN66 801 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 SCN1AP35498 2009 aa24.32■■□□□ 1.48
BRF1-216ENST00000550208 VWA8A3KMH1 1905 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 LRRIQ3A6PVS8 624 aaPredicted RBP24.31■■□□□ 1.48
BRF1-216ENST00000550208 SYN3O14994 580 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 TAF6P49848 677 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 FKBP3Q00688 224 aaKnown RBP24.31■■□□□ 1.48
BRF1-216ENST00000550208 DLX2Q07687 328 aaPredicted RBP24.31■■□□□ 1.48
BRF1-216ENST00000550208 KCNC3Q14003 757 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 PSMD5Q16401 504 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 TTI2Q6NXR4 508 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 GLYCTKQ8IVS8 523 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 ZC3H3Q8IXZ2 948 aaKnown RBP24.31■■□□□ 1.48
BRF1-216ENST00000550208 TMC2Q8TDI7 906 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 SLC22A17Q8WUG5 538 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 SENP8Q96LD8 212 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 CLSTN3Q9BQT9 956 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms