RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ANHXE9PGG2 379 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 K7ELQ4 463 aaPredicted RBP17.34■□□□□ 0.37
COX6A1-203ENST00000550009 PIGRP01833 764 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 CLTAP09496 248 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 CASP5P51878 434 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 FOXD4L6Q3SYB3 417 aaPredicted RBP17.34■□□□□ 0.37
COX6A1-203ENST00000550009 JADE1Q6IE81 842 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 CYP26C1Q6V0L0 522 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 FOXD4L3Q6VB84 417 aaPredicted RBP17.34■□□□□ 0.37
COX6A1-203ENST00000550009 ANKS3Q6ZW76 656 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 GPR152Q8TDT2 470 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 FGF13Q92913 245 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 DNAJC19Q96DA6 116 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 TCEAL4Q96EI5 215 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 TMEM209Q96SK2 561 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
COX6A1-203ENST00000550009 DPP7Q9UHL4 492 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 NUB1Q9Y5A7 615 aa17.34■□□□□ 0.37
COX6A1-203ENST00000550009 SPTLC1O15269 473 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 OGTO15294 1046 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 SLC26A4O43511 780 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 ABLIM3O94929 683 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 BMP15O95972 392 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 C1RP00736 705 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 CCR2P41597 374 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 GTF2BQ00403 316 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 CTXN3Q4LDR2 81 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 ASTLQ6HA08 431 aaPredicted RBP17.33■□□□□ 0.36
COX6A1-203ENST00000550009 SLC8B1Q6J4K2 584 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 RNF19BQ6ZMZ0 732 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 HS6ST3Q8IZP7 471 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 KCTD17Q8N5Z5 321 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 GLIS3Q8NEA6 775 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 KXD1Q9BQD3 176 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 MSTO1Q9BUK6 570 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 PLA2G2FQ9BZM2 168 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 KCNH6Q9H252 994 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 CRISPLD1Q9H336 500 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 IGSF9Q9P2J2 1179 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 CPSF3Q9UKF6 684 aaKnown RBP17.33■□□□□ 0.36
COX6A1-203ENST00000550009 FBXL21Q9UKT6 434 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 ZNF638Q14966 1978 aaKnown RBP17.33■□□□□ 0.36
COX6A1-203ENST00000550009 OBSL1O75147 1896 aa17.33■□□□□ 0.36
COX6A1-203ENST00000550009 TRAPPC3O43617 180 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 STX6O43752 255 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 LRRN2O75325 713 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 TBCAO75347 108 aaKnown RBP17.32■□□□□ 0.36
COX6A1-203ENST00000550009 PPP1R37O75864 691 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 HNRNPA1P09651 372 aaKnown RBP eCLIP17.32■□□□□ 0.36
COX6A1-203ENST00000550009 CEBPBP17676 345 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 ADSSP30520 456 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 LRPAP1P30533 357 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 RPL9P32969 192 aaKnown RBP17.32■□□□□ 0.36
COX6A1-203ENST00000550009 ELMSAN1Q6PJG2 1045 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 CRELD2Q6UXH1 353 aaPredicted RBP17.32■□□□□ 0.36
COX6A1-203ENST00000550009 MAP4K3Q8IVH8 894 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 NPAS3Q8IXF0 933 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 TTC9BQ8N6N2 239 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 PDILTQ8N807 584 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 ZNF461Q8TAF7 563 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 KCNN1Q92952 543 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 HPS3Q969F9 1004 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 MCRS1Q96EZ8 462 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 STRA6Q9BX79 667 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 RPF1Q9H9Y2 349 aaKnown RBP17.32■□□□□ 0.36
COX6A1-203ENST00000550009 CDH7Q9ULB5 785 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 COL4A2P08572 1712 aa17.32■□□□□ 0.36
COX6A1-203ENST00000550009 PATJQ8NI35 1801 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 ADRB2P07550 413 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 RHOP08100 348 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 GJA1P17302 382 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 PDCP20941 246 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 HOXA9P31269 272 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 GPC5P78333 572 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 PPP2R3AQ06190 1150 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 PKP1Q13835 747 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 SLC39A14Q15043 492 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 PABPC1LQ4VXU2 614 aaKnown RBP17.31■□□□□ 0.36
COX6A1-203ENST00000550009 RRAGBQ5VZM2 374 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 PDXDC1Q6P996 788 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 ZNF720Q7Z2F6 126 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 INTS4Q96HW7 963 aaKnown RBP17.31■□□□□ 0.36
COX6A1-203ENST00000550009 PGLYRP2Q96PD5 576 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 CYP4F11Q9HBI6 524 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.36
COX6A1-203ENST00000550009 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
COX6A1-203ENST00000550009 FANCMQ8IYD8 2048 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 NCANO14594 1321 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 ARHGEF37A1IGU5 675 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 M0QZQ0 153 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 SYN3O14994 580 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 GALR2O43603 387 aaPredicted RBP17.3■□□□□ 0.36
COX6A1-203ENST00000550009 SOAT2O75908 522 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 SRFP11831 508 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 ATF2P15336 505 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 PTPN5P54829 565 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 ADCY1Q08828 1119 aa17.3■□□□□ 0.36
COX6A1-203ENST00000550009 EFCAB13Q8IY85 973 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms