RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 BORCS6Q96GS4 357 aa12.89□□□□□ -0.35
PFDN5-208ENST00000549995 NUP62CLQ9H1M0 184 aa12.89□□□□□ -0.35
PFDN5-208ENST00000549995 PDE11AQ9HCR9 933 aa12.89□□□□□ -0.35
PFDN5-208ENST00000549995 ITGA11Q9UKX5 1188 aa12.89□□□□□ -0.35
PFDN5-208ENST00000549995 PCDHGC5Q9Y5F6 944 aa12.89□□□□□ -0.35
PFDN5-208ENST00000549995 PPEF2O14830 753 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 EXOC3O60645 756 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
PFDN5-208ENST00000549995 GLP2RO95838 553 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 CYP11A1P05108 521 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 URODP06132 367 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 NR2F2P24468 414 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 RPL13P26373 211 aaKnown RBP12.88□□□□□ -0.35
PFDN5-208ENST00000549995 LTBRP36941 435 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 CYP2J2P51589 502 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 GUCY2FP51841 1108 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 AP3M2P53677 418 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 LILRA4P59901 499 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 LNX1Q8TBB1 728 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-208ENST00000549995 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 CACTINQ8WUQ7 758 aaKnown RBP12.88□□□□□ -0.35
PFDN5-208ENST00000549995 KLHL5Q96PQ7 755 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 TTPALQ9BTX7 342 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 MRPL17Q9NRX2 175 aaKnown RBP12.88□□□□□ -0.35
PFDN5-208ENST00000549995 DPP3Q9NY33 737 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 MTRRQ9UBK8 725 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 SIX4Q9UIU6 781 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 BACE2Q9Y5Z0 518 aa12.88□□□□□ -0.35
PFDN5-208ENST00000549995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-208ENST00000549995 PSMA7O14818 248 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
PFDN5-208ENST00000549995 CLASP2O75122 1294 aaKnown RBP12.87□□□□□ -0.35
PFDN5-208ENST00000549995 AKAP3O75969 853 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 CXCL14O95715 111 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 TYMPP19971 482 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 MCM4P33991 863 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 PNPLA4P41247 253 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 BRCC3P46736 316 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 CASP4P49662 377 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 PMS1P54277 932 aaKnown RBP12.87□□□□□ -0.35
PFDN5-208ENST00000549995 STIM1Q13586 685 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 FAM171A1Q5VUB5 890 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 C15orf39Q6ZRI6 1047 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 INTS8Q75QN2 995 aaKnown RBP12.87□□□□□ -0.35
PFDN5-208ENST00000549995 LIMS2Q7Z4I7 341 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 TMEM130Q8N3G9 435 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 VN1R2Q8NFZ6 395 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 OR5B17Q8NGF7 314 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 HDAC7Q8WUI4 952 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 ZNF560Q96MR9 790 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 RHOBTB2Q9BYZ6 727 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 MTMR12Q9C0I1 747 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 UBE2ZQ9H832 354 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-208ENST00000549995 VRTNQ9H8Y1 702 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 MAPK8IP1Q9UQF2 711 aa12.87□□□□□ -0.35
PFDN5-208ENST00000549995 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 IKBKBO14920 756 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 SPTLC1O15269 473 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 TBX10O75333 385 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 OAZ2O95190 189 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 CNPP09543 421 aaKnown RBP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 GTF2F1P35269 517 aaKnown RBP eCLIP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 NRIP1P48552 1158 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 NDUFV1P49821 464 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 TAF6P49848 677 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 CLCN4P51793 760 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 FKBP3Q00688 224 aaKnown RBP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 ADAM9Q13443 819 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 CAMK4Q16566 473 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 CT47A1Q5JQC4 288 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 SLC8B1Q6J4K2 584 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 MICALL1Q8N3F8 863 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 HASPINQ8TF76 798 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 AUTS2Q8WXX7 1259 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 CLSTN3Q9BQT9 956 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 OXCT2Q9BYC2 517 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-208ENST00000549995 TLE6Q9H808 572 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 GDAP2Q9NXN4 497 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 CLEC1BQ9P126 229 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 C2orf16Q68DN1 1984 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 UNC80Q8N2C7 3258 aa12.86□□□□□ -0.35
PFDN5-208ENST00000549995 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms