RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 CCDC113Q9H0I3 377 aa17.01■□□□□ 0.31
TCHP-208ENST00000549550 GOLGA2P5Q9HBQ8 144 aa17.01■□□□□ 0.31
TCHP-208ENST00000549550 ZFP14Q9HCL3 533 aa17.01■□□□□ 0.31
TCHP-208ENST00000549550 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.01■□□□□ 0.31
TCHP-208ENST00000549550 ACKR2O00590 384 aa17■□□□□ 0.31
TCHP-208ENST00000549550 NRG2O14511 850 aaPredicted RBP17■□□□□ 0.31
TCHP-208ENST00000549550 TRAPPC3O43617 180 aa17■□□□□ 0.31
TCHP-208ENST00000549550 NEMFO60524 1076 aa17■□□□□ 0.31
TCHP-208ENST00000549550 SPATA31C1P0DKV0 1188 aa17■□□□□ 0.31
TCHP-208ENST00000549550 BRCC3P46736 316 aa17■□□□□ 0.31
TCHP-208ENST00000549550 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
TCHP-208ENST00000549550 GNL2Q13823 731 aaKnown RBP17■□□□□ 0.31
TCHP-208ENST00000549550 ST3GAL2Q16842 350 aa17■□□□□ 0.31
TCHP-208ENST00000549550 MAMSTRQ6ZN01 415 aa17■□□□□ 0.31
TCHP-208ENST00000549550 PRR23BQ6ZRT6 265 aa17■□□□□ 0.31
TCHP-208ENST00000549550 CELF5Q8N6W0 485 aaKnown RBP17■□□□□ 0.31
TCHP-208ENST00000549550 UROC1Q96N76 676 aa17■□□□□ 0.31
TCHP-208ENST00000549550 MORC2Q9Y6X9 1032 aaPredicted RBP17■□□□□ 0.31
TCHP-208ENST00000549550 WDR27A2RRH5 827 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 WNT7AO00755 349 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 PRPF40AO75400 957 aaKnown RBP16.99■□□□□ 0.31
TCHP-208ENST00000549550 ABLIM3O94929 683 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 YEATS4O95619 227 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 ELF1P32519 619 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 CCR2P41597 374 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 CCR3P51677 355 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 DCAF4L1Q3SXM0 396 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 PPM1JQ5JR12 505 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 SLC8B1Q6J4K2 584 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 NETO1Q8TDF5 533 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 FAM3CQ92520 227 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 IRF7Q92985 503 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 SYAP1Q96A49 352 aaPredicted RBP16.99■□□□□ 0.31
TCHP-208ENST00000549550 ASB16Q96NS5 453 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 MTMR9Q96QG7 549 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 IER2Q9BTL4 223 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 LMAN1LQ9HAT1 526 aa16.99■□□□□ 0.31
TCHP-208ENST00000549550 ZNF334Q9HCZ1 680 aaPredicted RBP16.99■□□□□ 0.31
TCHP-208ENST00000549550 GREB1Q4ZG55 1949 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.98■□□□□ 0.31
TCHP-208ENST00000549550 ZNF197O14709 1029 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 SLC30A4O14863 429 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 ATF2P15336 505 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 GDI1P31150 447 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 NAMPTP43490 491 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 ARPP19P56211 112 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 RILPL1Q5EBL4 403 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 VITQ6UXI7 678 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 PDZD4Q76G19 769 aaPredicted RBP16.98■□□□□ 0.31
TCHP-208ENST00000549550 CATSPER3Q86XQ3 398 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 MAP4K3Q8IVH8 894 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 SPATA32Q96LK8 384 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 CYP4F11Q9HBI6 524 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 TUFT1Q9NNX1 390 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 RCOR1Q9UKL0 485 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 PIAS3Q9Y6X2 628 aa16.98■□□□□ 0.31
TCHP-208ENST00000549550 KIF26AQ9ULI4 1882 aaPredicted RBP16.98■□□□□ 0.31
TCHP-208ENST00000549550 LAMA1P25391 3075 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 LRP3O75074 770 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 MED24O75448 989 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 MICAL2O94851 1124 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 SEC24AO95486 1093 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 BMP15O95972 392 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 RETP07949 1114 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 PSMC3P17980 439 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 SATB1Q01826 763 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
TCHP-208ENST00000549550 ATF7IP2Q5U623 682 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 PADI6Q6TGC4 694 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 DIS3L2Q8IYB7 885 aaKnown RBP16.97■□□□□ 0.31
TCHP-208ENST00000549550 TCEAL8Q8IYN2 117 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 ZSWIM3Q96MP5 696 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 NACC1Q96RE7 527 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 KIFC3Q9BVG8 833 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 TRPV5Q9NQA5 729 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 INSL5Q9Y5Q6 135 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 CNOT1A5YKK6 2376 aaKnown RBP16.97■□□□□ 0.31
TCHP-208ENST00000549550 SPAG17Q6Q759 2223 aa16.97■□□□□ 0.31
TCHP-208ENST00000549550 SMIM28A0A1B0GU29 152 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 CYP11B2P19099 503 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 CXCL12P48061 93 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 TRAPPC10P48553 1259 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 NASPP49321 788 aaPredicted RBP16.96■□□□□ 0.31
TCHP-208ENST00000549550 SIM2Q14190 667 aaPredicted RBP16.96■□□□□ 0.31
TCHP-208ENST00000549550 PPP2R5AQ15172 486 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 CYP4A22Q5TCH4 519 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 NT5DC1Q5TFE4 455 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 HS6ST3Q8IZP7 471 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 LEO1Q8WVC0 666 aaPredicted RBP16.96■□□□□ 0.31
TCHP-208ENST00000549550 SMARCD2Q92925 531 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 SEMA4GQ9NTN9 838 aa16.96■□□□□ 0.31
TCHP-208ENST00000549550 FRYQ5TBA9 3013 aa16.95■□□□□ 0.3
TCHP-208ENST00000549550 ARHGEF35A5YM69 484 aa16.95■□□□□ 0.3
TCHP-208ENST00000549550 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
TCHP-208ENST00000549550 BTBD18B2RXH4 712 aa16.95■□□□□ 0.3
TCHP-208ENST00000549550 CHRNB1P11230 501 aa16.95■□□□□ 0.3
TCHP-208ENST00000549550 CCNE1P24864 410 aa16.95■□□□□ 0.3
TCHP-208ENST00000549550 VIPR2P41587 438 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms