RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HAUS6Q7Z4H7 955 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 YTHDF3Q7Z739 585 aaKnown RBP11.82□□□□□ -0.52
LINC00661-204ENST00000549354 ANKS4BQ8N8V4 417 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 CALR3Q96L12 384 aaKnown RBP11.82□□□□□ -0.52
LINC00661-204ENST00000549354 SLITRK6Q9H5Y7 841 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 CCT8L1PA6NM43 557 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 POC1B-GALNT4F8VUJ3 575 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 DDX3YO15523 660 aaKnown RBP11.82□□□□□ -0.52
LINC00661-204ENST00000549354 MAP3K6O95382 1288 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 FERP16591 822 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 ELF1P32519 619 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 GSCP56915 257 aaPredicted RBP11.82□□□□□ -0.52
LINC00661-204ENST00000549354 SNAPC2Q13487 334 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 XKR3Q5GH77 459 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 CCT6BQ92526 530 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 AGAP1Q9UPQ3 857 aa11.82□□□□□ -0.52
LINC00661-204ENST00000549354 PMM2O15305 246 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 DGAT1O75907 488 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 GH1P01241 217 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ATF7P17544 494 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ORC1Q13415 861 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ATP13A4Q4VNC1 1196 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ERMARDQ5T6L9 678 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 NUGGCQ68CJ6 796 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 HOOK3Q86VS8 718 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 TMEM161BQ8NDZ6 487 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 EPB41L4BQ9H329 900 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 PABPC3Q9H361 631 aaKnown RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 MROH8Q9H579 483 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ANKFY1Q9P2R3 1169 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 TCP11X1B4DZS4 312 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 RASGRF2O14827 1237 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ZBTB48P10074 688 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 CD58P19256 250 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ATP4AP20648 1035 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ACOT2P49753 483 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 Q3C1V9 767 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 C10orf76Q5T2E6 689 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 NCAPG2Q86XI2 1143 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 PRELID2Q8N945 189 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 MCPH1Q8NEM0 835 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 POMGNT1Q8WZA1 660 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 KLF6Q99612 283 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 NUP85Q9BW27 656 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 FAM129AQ9BZQ8 928 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 NOD2Q9HC29 1040 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 CYP26B1Q9NR63 512 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 F5H423 210 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 KIAA0391O15091 583 aaKnown RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 UBOX5O94941 541 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 PAX7P23759 505 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ABCD1P33897 745 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 JAM2P57087 298 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 PTENP60484 403 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 FKBP1BP68106 108 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ELF3P78545 371 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 PRKCEQ02156 737 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 ENPEPQ07075 957 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 TTLL12Q14166 644 aaPredicted RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 AGBL2Q5U5Z8 902 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 MAP4K3Q8IVH8 894 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 SRRM1Q8IYB3 904 aaKnown RBP11.81□□□□□ -0.52
LINC00661-204ENST00000549354 CCDC33Q8N5R6 958 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 R3HDMLQ9H3Y0 253 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 XPNPEP1Q9NQW7 623 aa11.81□□□□□ -0.52
LINC00661-204ENST00000549354 GOLGA8RI6L899 631 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 FARP2O94887 1054 aaPredicted RBP11.8□□□□□ -0.52
LINC00661-204ENST00000549354 TNNI1P19237 187 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 UBA1P22314 1058 aaKnown RBP11.8□□□□□ -0.52
LINC00661-204ENST00000549354 NPTX2P47972 431 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 RNASELQ05823 741 aaKnown RBP11.8□□□□□ -0.52
LINC00661-204ENST00000549354 DUPD1Q68J44 220 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 SCARA3Q6AZY7 606 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 ZDHHC24Q6UX98 284 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 RFX8Q6ZV50 586 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 CEP170P1Q96L14 293 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 PCDHB18PQ96TA0 734 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 ACTR5Q9H9F9 607 aaPredicted RBP11.8□□□□□ -0.52
LINC00661-204ENST00000549354 KCNG1Q9UIX4 513 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 PPME1Q9Y570 386 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 BANF1O75531 89 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 ADCY8P40145 1251 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 PRKCIP41743 596 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 POU5F1Q01860 360 aaKnown RBP11.8□□□□□ -0.52
LINC00661-204ENST00000549354 SLFN11Q7Z7L1 901 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 C11orf70Q9BRQ4 267 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 TCHPQ9BT92 498 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 ADAM7Q9H2U9 754 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 ZDHHC18Q9NUE0 388 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 SAE1Q9UBE0 346 aaPredicted RBP11.8□□□□□ -0.52
LINC00661-204ENST00000549354 ANAPC7Q9UJX3 599 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 TBX20Q9UMR3 447 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 PPFIA2O75334 1257 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 NEBLO76041 1014 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 KRT10P13645 584 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 293.6 ms