RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 FAM187BQ17R55 369 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 VITQ6UXI7 678 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 TMX3Q96JJ7 454 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 ASB16Q96NS5 453 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 SMG1Q96Q15 3661 aaKnown RBP13.43□□□□□ -0.26
DDX54-206ENST00000549271 ADAM33Q9BZ11 813 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
DDX54-206ENST00000549271 LHX6Q9UPM6 363 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 FREM2Q5SZK8 3169 aa13.43□□□□□ -0.26
DDX54-206ENST00000549271 FLNBO75369 2602 aaKnown RBP13.43□□□□□ -0.26
DDX54-206ENST00000549271 TAF4O00268 1085 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 B4GALT5O43286 388 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 MICAL2O94851 1124 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 SPATA31C1P0DKV0 1188 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 PTPN2P17706 415 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 ATP2B1P20020 1258 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 GDI1P31150 447 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 TXKP42681 527 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
DDX54-206ENST00000549271 LRRC32Q14392 662 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 CDCA2Q69YH5 1023 aaPredicted RBP13.42□□□□□ -0.26
DDX54-206ENST00000549271 Q6ZS52 159 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 FAM184AQ8NB25 1140 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 CCDC43Q96MW1 224 aaKnown RBP13.42□□□□□ -0.26
DDX54-206ENST00000549271 POLR3FQ9H1D9 316 aaPredicted RBP13.42□□□□□ -0.26
DDX54-206ENST00000549271 FZD8Q9H461 694 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
DDX54-206ENST00000549271 TUFT1Q9NNX1 390 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 RBM12Q9NTZ6 932 aaKnown RBP13.42□□□□□ -0.26
DDX54-206ENST00000549271 PRMT7Q9NVM4 692 aaPredicted RBP13.42□□□□□ -0.26
DDX54-206ENST00000549271 KLK14Q9P0G3 267 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 MTRRQ9UBK8 725 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 LAMA5O15230 3695 aa13.42□□□□□ -0.26
DDX54-206ENST00000549271 IGSF10Q6WRI0 2623 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 WDR27A2RRH5 827 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 GIPC1O14908 333 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 SPINK2P20155 84 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 FGFR3P22607 806 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 U2AF2P26368 475 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDX54-206ENST00000549271 MCM7P33993 719 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 NOVA1P51513 510 aaKnown RBP13.41□□□□□ -0.26
DDX54-206ENST00000549271 FOXC1Q12948 553 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 ZNF174Q15697 407 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 C1orf228Q6PIY5 440 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
DDX54-206ENST00000549271 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 C4orf32Q8N8J7 132 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 PIGOQ8TEQ8 1089 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 DEPDC1BQ8WUY9 529 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 GAB3Q8WWW8 586 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 TCEAL4Q96EI5 215 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 MSANTD3Q96H12 275 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 POLR3CQ9BUI4 534 aaPredicted RBP13.41□□□□□ -0.26
DDX54-206ENST00000549271 SMOC1Q9H4F8 434 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 PCDHGA5Q9Y5G8 931 aa13.41□□□□□ -0.26
DDX54-206ENST00000549271 NCANO14594 1321 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 CASTOR2A6NHX0 329 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 USO1O60763 962 aaKnown RBP13.4□□□□□ -0.26
DDX54-206ENST00000549271 NPTXRO95502 500 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 TOP3BO95985 862 aaKnown RBP13.4□□□□□ -0.26
DDX54-206ENST00000549271 CCR2P41597 374 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 TOB1P50616 345 aaPredicted RBP13.4□□□□□ -0.26
DDX54-206ENST00000549271 ZNF252P-AS1Q0IIN9 211 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 ORC2Q13416 577 aaPredicted RBP13.4□□□□□ -0.26
DDX54-206ENST00000549271 NAB2Q15742 525 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 RNF43Q68DV7 783 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 CACNA2D4Q7Z3S7 1137 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 KBTBD6Q86V97 674 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 CATSPER3Q86XQ3 398 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 SMARCD2Q92925 531 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 ZSWIM3Q96MP5 696 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 NACC1Q96RE7 527 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 TRPV4Q9HBA0 871 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 CDY1Q9Y6F8 540 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 ADAMTS20P59510 1910 aa13.4□□□□□ -0.26
DDX54-206ENST00000549271 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 PTGESO14684 152 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 ZNF263O14978 683 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 MUTP22033 750 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 RPA1P27694 616 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 MPLP40238 635 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 VIPR2P41587 438 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 DGKKQ5KSL6 1271 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 MFSD6LQ8IWD5 586 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 ZBTB8OSQ8IWT0 167 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 ZCCHC14Q8WYQ9 949 aaKnown RBP13.39□□□□□ -0.27
DDX54-206ENST00000549271 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 C2orf40Q9H1Z8 148 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 GPRC5CQ9NQ84 441 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 VPS45Q9NRW7 570 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 PARP2Q9UGN5 583 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 BACE2Q9Y5Z0 518 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
DDX54-206ENST00000549271 TRIP11Q15643 1979 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 NUP205Q92621 2012 aa13.39□□□□□ -0.27
DDX54-206ENST00000549271 A0A087WWV3 80 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 CCDC163A0A0D9SF12 145 aa13.38□□□□□ -0.27
DDX54-206ENST00000549271 ACKR2O00590 384 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms