RNA–Protein interactions for RNA: ENST00000548961.5

RACGAP1-216, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3 BASIC

Gene RACGAP1, Length 387 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-216ENST00000548961 UPP1Q16831 310 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 TPD52L1Q16890 204 aaPredicted RBP7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 DUOXA2Q1HG44 320 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 SPATA1Q5VX52 437 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 SCARA3Q6AZY7 606 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 TTI2Q6NXR4 508 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 DCLRE1AQ6PJP8 1040 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 TMC7Q7Z402 723 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 DDX53Q86TM3 631 aaKnown RBP7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 EFCAB13Q8IY85 973 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 VPS52Q8N1B4 723 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 CSGALNACT2Q8N6G5 542 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 OR5B17Q8NGF7 314 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 PLEKHO2Q8TD55 490 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 AUTS2Q8WXX7 1259 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 ZNF516Q92618 1163 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 DDX27Q96GQ7 796 aaKnown RBP7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 ANKRD36BP1Q96IX9 119 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 B3GALT6Q96L58 329 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 MFSD14AQ96MC6 490 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 FBXL18Q96ME1 805 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 SRRTQ9BXP5 876 aaKnown RBP7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 GPR62Q9BZJ7 368 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 MTMR12Q9C0I1 747 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 GZF1Q9H116 711 aaPredicted RBP7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 MARCH5Q9NX47 278 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 MTMR10Q9NXD2 777 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 DACH1Q9UI36 760 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 RWDD2AQ9UIY3 292 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 ADAM28Q9UKQ2 775 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 AGAP1Q9UPQ3 857 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 DERAQ9Y315 318 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 R3HCC1Q9Y3T6 440 aaKnown RBP7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 NUB1Q9Y5A7 615 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 PCDHGC5Q9Y5F6 944 aa7.32□□□□□ -1.24
RACGAP1-216ENST00000548961 PTPRJQ12913 1337 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 REV3LO60673 3130 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 SYCE3A1L190 88 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 CARNS1A5YM72 827 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 LRRIQ3A6PVS8 624 aaPredicted RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 LPXNO60711 386 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 LETM1O95202 739 aaPredicted RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 FGFR1OPO95684 399 aaKnown RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 ITGB3P05106 788 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 TRIM49P0CI25 452 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 TRIM49CP0CI26 452 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 FOSL2P15408 326 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 CYP3A5P20815 502 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 LRPAP1P30533 357 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 POLR2BP30876 1174 aaKnown RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 RPL9P32969 192 aaKnown RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 IRS1P35568 1242 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 BRCC3P46736 316 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 PLCB3Q01970 1234 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 BFSP1Q12934 665 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 BIRC3Q13489 604 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 STX1AQ16623 288 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 NFIL3Q16649 462 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 PTPROQ16827 1216 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 CCDC40Q4G0X9 1142 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 HSP90AA4PQ58FG1 418 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 DCAF17Q5H9S7 520 aaPredicted RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 FAM171A1Q5VUB5 890 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 TCERG1LQ5VWI1 586 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 PLPP4Q5VZY2 271 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 C9orf57Q5W0N0 161 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 KIAA1841Q6NSI8 718 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 CD300LGQ6UXG3 332 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 DSTYKQ6XUX3 929 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 RBM43Q6ZSC3 357 aaKnown RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 RBM23Q86U06 439 aaKnown RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 WDR49Q8IV35 697 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 C1orf127Q8N9H9 656 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 C3orf58Q8NDZ4 430 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 TMC2Q8TDI7 906 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 PARD3BQ8TEW8 1205 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 RIN2Q8WYP3 895 aaPredicted RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 KHSRPQ92945 711 aaKnown RBP eCLIP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 MRPL38Q96DV4 380 aaKnown RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 GUCD1Q96NT3 240 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 TSPAN18Q96SJ8 248 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 CGRRF1Q99675 332 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 TCF25Q9BQ70 676 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 VN1R3Q9BXE9 311 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 IGFLR1Q9H665 355 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 ENTPD7Q9NQZ7 604 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 TLR9Q9NR96 1032 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 INTS13Q9NVM9 706 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 ANO10Q9NW15 660 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 ARMCX3Q9UH62 379 aaPredicted RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 C2CD2Q9Y426 696 aa7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 COL4A4P53420 1690 aaPredicted RBP7.31□□□□□ -1.24
RACGAP1-216ENST00000548961 SF3B1O75533 1304 aaKnown RBP eCLIP7.3□□□□□ -1.24
RACGAP1-216ENST00000548961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.3□□□□□ -1.24
RACGAP1-216ENST00000548961 HIDE1A8MVS5 230 aa7.3□□□□□ -1.24
RACGAP1-216ENST00000548961 DLL1O00548 723 aa7.3□□□□□ -1.24
RACGAP1-216ENST00000548961 PER2O15055 1255 aa7.3□□□□□ -1.24
RACGAP1-216ENST00000548961 TRAPPC3O43617 180 aa7.3□□□□□ -1.24
RACGAP1-216ENST00000548961 CST3P01034 146 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms