RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SPIRE1Q08AE8 756 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 NR5A1Q13285 461 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 TUSC3Q13454 348 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 SAFBQ15424 915 aaKnown RBP eCLIP9.34□□□□□ -0.91
TROAP-208ENST00000548817 AXDND1Q5T1B0 1012 aaPredicted RBP9.34□□□□□ -0.91
TROAP-208ENST00000548817 FAM171A1Q5VUB5 890 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 KBTBD6Q86V97 674 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 CDR2LQ86X02 465 aaPredicted RBP9.34□□□□□ -0.91
TROAP-208ENST00000548817 SLC7A14Q8TBB6 771 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 PIGOQ8TEQ8 1089 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 MCRS1Q96EZ8 462 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 B3GALT6Q96L58 329 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 NACC1Q96RE7 527 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 TTPALQ9BTX7 342 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 C8orf33Q9H7E9 229 aaPredicted RBP9.34□□□□□ -0.91
TROAP-208ENST00000548817 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 DNMT3BQ9UBC3 853 aaKnown RBP9.34□□□□□ -0.91
TROAP-208ENST00000548817 DAXXQ9UER7 740 aaPredicted RBP9.34□□□□□ -0.91
TROAP-208ENST00000548817 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 ACACAQ13085 2346 aa9.34□□□□□ -0.91
TROAP-208ENST00000548817 FAM205CA6NFA0 338 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 F8W810 466 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 B4GALT5O43286 388 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
TROAP-208ENST00000548817 CAPNS1P04632 268 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 CCDC192P0DO97 292 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 GDI1P31150 447 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 RDXP35241 583 aaKnown RBP9.33□□□□□ -0.92
TROAP-208ENST00000548817 FOSBP53539 338 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 ANAPC15P60006 121 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 PRPF4BQ13523 1007 aaKnown RBP9.33□□□□□ -0.92
TROAP-208ENST00000548817 RAB33AQ14088 237 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 PPP2R5AQ15172 486 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 ELF2Q15723 593 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 PSMD5Q16401 504 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 MAPK6Q16659 721 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 AMHR2Q16671 573 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 EARS2Q5JPH6 523 aaKnown RBP9.33□□□□□ -0.92
TROAP-208ENST00000548817 RTP2Q5QGT7 225 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 PRSS55Q6UWB4 352 aaPredicted RBP9.33□□□□□ -0.92
TROAP-208ENST00000548817 PPP4R3CPQ6ZMV5 832 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 DEPTORQ8TB45 409 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 ADAM32Q8TC27 787 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 ING5Q8WYH8 240 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 RABGGTAQ92696 567 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 IFT74Q96LB3 600 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 CLSTN3Q9BQT9 956 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 TMEM9BQ9NQ34 198 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 HCFC1R1Q9NWW0 138 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 PDCD11Q14690 1871 aaKnown RBP9.33□□□□□ -0.92
TROAP-208ENST00000548817 CFAP46Q8IYW2 2715 aa9.33□□□□□ -0.92
TROAP-208ENST00000548817 A0A087WWV3 80 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 LNP1A1A4G5 178 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 ARHGEF35A5YM69 484 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 CASTOR2A6NHX0 329 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 ARNTLO00327 626 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 ZNF197O14709 1029 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 ZNF263O14978 683 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 TRAPPC3O43617 180 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
TROAP-208ENST00000548817 PRKCBP05771 671 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 RHOP08100 348 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 CCNE1P24864 410 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 MCM7P33993 719 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 GNL2Q13823 731 aaKnown RBP9.32□□□□□ -0.92
TROAP-208ENST00000548817 GRM2Q14416 872 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 KARSQ15046 597 aaKnown RBP9.32□□□□□ -0.92
TROAP-208ENST00000548817 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 FAM78AQ5JUQ0 283 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 Q6ZS52 159 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 DIS3L2Q8IYB7 885 aaKnown RBP9.32□□□□□ -0.92
TROAP-208ENST00000548817 NECAB1Q8N987 351 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 LNX1Q8TBB1 728 aaPredicted RBP9.32□□□□□ -0.92
TROAP-208ENST00000548817 CSGALNACT1Q8TDX6 532 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 HASPINQ8TF76 798 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 SMARCD2Q92925 531 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 E2F7Q96AV8 911 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 ASB16Q96NS5 453 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 SLC32A1Q9H598 525 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 TRPV4Q9HBA0 871 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 TUFT1Q9NNX1 390 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 SNTG2Q9NY99 539 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 MYO18BQ8IUG5 2567 aa9.32□□□□□ -0.92
TROAP-208ENST00000548817 SPTA1P02549 2419 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 BCLAF3A2AJT9 711 aaKnown RBP9.31□□□□□ -0.92
TROAP-208ENST00000548817 ACKR2O00590 384 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 DTNBO60941 627 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 RHOBTB1O94844 696 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 CTDNEP1O95476 244 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 CAVIN2O95810 425 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 CEBPBP17676 345 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 PTPN2P17706 415 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 EFNA5P52803 228 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 C19orf57Q0VDD7 668 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 FAM187BQ17R55 369 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 SLC5A9Q2M3M2 681 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 DCAF4L1Q3SXM0 396 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 PLK5Q496M5 336 aa9.31□□□□□ -0.92
TROAP-208ENST00000548817 TCEAL6Q6IPX3 200 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms