RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PRSS36Q5K4E3 855 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 DGKKQ5KSL6 1271 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 AXDND1Q5T1B0 1012 aaPredicted RBP15.48■□□□□ 0.07
PTCH1-217ENST00000548420 NOSTRINQ8IVI9 506 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 ASB16Q96NS5 453 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 CACNG4Q9UBN1 327 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 CEP131Q9UPN4 1083 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 TEX15Q9BXT5 2789 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 VWA8A3KMH1 1905 aa15.48■□□□□ 0.07
PTCH1-217ENST00000548420 TDRD15B5MCY1 1934 aaKnown RBP15.48■□□□□ 0.07
PTCH1-217ENST00000548420 SLC38A8A6NNN8 435 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 H0Y626 953 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 KHNYNO15037 678 aaKnown RBP15.47■□□□□ 0.07
PTCH1-217ENST00000548420 ATXN7O15265 892 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-217ENST00000548420 TRIM16O95361 564 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 MLLT6P55198 1093 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-217ENST00000548420 ORC2Q13416 577 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-217ENST00000548420 EPHA7Q15375 998 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 XKR3Q5GH77 459 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 SMG8Q8ND04 991 aaKnown RBP15.47■□□□□ 0.07
PTCH1-217ENST00000548420 LNX1Q8TBB1 728 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-217ENST00000548420 TMEM60Q9H2L4 133 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 SLC32A1Q9H598 525 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 PCDHA12Q9UN75 941 aa15.47■□□□□ 0.07
PTCH1-217ENST00000548420 CNTNAP2Q9UHC6 1331 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 THADAQ6YHU6 1953 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 IGKV6-21A0A0C4DH24 114 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 PYCARD-AS1I3L0S3 204 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 NEMFO60524 1076 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 P4HBP07237 508 aaKnown RBP15.46■□□□□ 0.07
PTCH1-217ENST00000548420 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTCH1-217ENST00000548420 CCR2P41597 374 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 QARSP47897 775 aaKnown RBP15.46■□□□□ 0.07
PTCH1-217ENST00000548420 TRAPPC10P48553 1259 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 PSMC5P62195 406 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 PON2Q15165 354 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 CALCRLQ16602 461 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 CCNI2Q6ZMN8 369 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-217ENST00000548420 RSPRY1Q96DX4 576 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 ZFP42Q96MM3 310 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 GAD1Q99259 594 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 COLEC11Q9BWP8 271 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 AVENQ9NQS1 362 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-217ENST00000548420 WRAP73Q9P2S5 460 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-217ENST00000548420 KIF3AQ9Y496 699 aa15.46■□□□□ 0.07
PTCH1-217ENST00000548420 GON4LQ3T8J9 2241 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 WDR27A2RRH5 827 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 MYBPHLA2RUH7 354 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 ARL5CA6NH57 179 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 ZNF263O14978 683 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 GJB2P29033 226 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 SCNN1GP51170 649 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 CREMQ03060 361 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 SEMA3BQ13214 749 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 ANO5Q75V66 913 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 KSR1Q8IVT5 923 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 C4orf19Q8IY42 314 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 C4orf32Q8N8J7 132 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 TTC8Q8TAM2 541 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 HSD17B14Q9BPX1 270 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-217ENST00000548420 ADAM28Q9UKQ2 775 aa15.45■□□□□ 0.06
PTCH1-217ENST00000548420 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-217ENST00000548420 PI4KAP42356 2102 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 SPECC1L-ADORA2AF8WAN1 911 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 MARCH6O60337 910 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 DKC1O60832 514 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTCH1-217ENST00000548420 RHOBTB1O94844 696 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 SLITRK3O94933 977 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 LYPLA2O95372 231 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 HOXA11P31270 313 aaPredicted RBP15.44■□□□□ 0.06
PTCH1-217ENST00000548420 CTHP32929 405 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 MCM7P33993 719 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 MLH1P40692 756 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
PTCH1-217ENST00000548420 ELF2Q15723 593 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 CATSPER4Q7RTX7 472 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 PAAF1Q9BRP4 392 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 AGPAT5Q9NUQ2 364 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 COL12A1Q99715 3063 aa15.44■□□□□ 0.06
PTCH1-217ENST00000548420 KIF26AQ9ULI4 1882 aaPredicted RBP15.44■□□□□ 0.06
PTCH1-217ENST00000548420 TMEM150BA6NC51 233 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 DDX11L8A8MPP1 907 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 MOSPD3O75425 235 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 ATP2B1P20020 1258 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 TXKP42681 527 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 ZNF174Q15697 407 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 PSMD5Q16401 504 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 TTC38Q5R3I4 469 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 NCAPH2Q6IBW4 605 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 MFSD6LQ8IWD5 586 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 GSTCDQ8NEC7 633 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 DEPDC1BQ8WUY9 529 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 SMARCD2Q92925 531 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 DYDC2Q96IM9 177 aa15.43■□□□□ 0.06
PTCH1-217ENST00000548420 EIF2AK1Q9BQI3 630 aaKnown RBP15.43■□□□□ 0.06
PTCH1-217ENST00000548420 C8orf33Q9H7E9 229 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms