RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SMIM28A0A1B0GU29 152 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 KIAA0391O15091 583 aaKnown RBP18.79■□□□□ 0.6
HDAC7-227ENST00000548080 THP07101 528 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 CLTAP09496 248 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 IGFBP6P24592 240 aaPredicted RBP18.79■□□□□ 0.6
HDAC7-227ENST00000548080 IRS1P35568 1242 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 KCNH2Q12809 1159 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 CAMK1Q14012 370 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 SYCP1Q15431 976 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 NAB2Q15742 525 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 PPFIBP1Q86W92 1011 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 CCDC150Q8NCX0 1101 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 HASPINQ8TF76 798 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 C18orf25Q96B23 403 aaPredicted RBP18.79■□□□□ 0.6
HDAC7-227ENST00000548080 PPP1R10Q96QC0 940 aaKnown RBP18.79■□□□□ 0.6
HDAC7-227ENST00000548080 FAM213AQ9BRX8 229 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 TOPORSQ9NS56 1045 aaPredicted RBP18.79■□□□□ 0.6
HDAC7-227ENST00000548080 FAN1Q9Y2M0 1017 aa18.79■□□□□ 0.6
HDAC7-227ENST00000548080 LACTBL1A8MY62 500 aa18.78■□□□□ 0.6
HDAC7-227ENST00000548080 KRT13P13646 458 aa18.78■□□□□ 0.6
HDAC7-227ENST00000548080 SOX4Q06945 474 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-227ENST00000548080 TRIM14Q14142 442 aa18.78■□□□□ 0.6
HDAC7-227ENST00000548080 HSP90AA2PQ14568 343 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-227ENST00000548080 TCERG1LQ5VWI1 586 aa18.78■□□□□ 0.6
HDAC7-227ENST00000548080 CRELD2Q6UXH1 353 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-227ENST00000548080 ALKAL1Q6UXT8 129 aa18.78■□□□□ 0.6
HDAC7-227ENST00000548080 INTS8Q75QN2 995 aaKnown RBP18.78■□□□□ 0.6
HDAC7-227ENST00000548080 RDH13Q8NBN7 331 aa18.78■□□□□ 0.6
HDAC7-227ENST00000548080 FAM84AQ96KN4 292 aa18.78■□□□□ 0.6
HDAC7-227ENST00000548080 RPF1Q9H9Y2 349 aaKnown RBP18.78■□□□□ 0.6
HDAC7-227ENST00000548080 CPSF3Q9UKF6 684 aaKnown RBP18.78■□□□□ 0.6
HDAC7-227ENST00000548080 AFPP02771 609 aaKnown RBP18.77■□□□□ 0.6
HDAC7-227ENST00000548080 GUCY2FP51841 1108 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 WNT7BP56706 349 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 ERVFC1P60507 584 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 ARID5BQ14865 1188 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 DCAF17Q5H9S7 520 aaPredicted RBP18.77■□□□□ 0.6
HDAC7-227ENST00000548080 GPD1LQ8N335 351 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 MAFAQ8NHW3 353 aaPredicted RBP18.77■□□□□ 0.6
HDAC7-227ENST00000548080 RSPH1Q8WYR4 309 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 SLC35C1Q96A29 364 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 MRPL38Q96DV4 380 aaKnown RBP18.77■□□□□ 0.6
HDAC7-227ENST00000548080 TMEM169Q96HH4 297 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 IGSF21Q96ID5 467 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 FBXL18Q96ME1 805 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 PCMTD1Q96MG8 357 aaPredicted RBP18.77■□□□□ 0.6
HDAC7-227ENST00000548080 ZNF830Q96NB3 372 aaPredicted RBP18.77■□□□□ 0.6
HDAC7-227ENST00000548080 VN1R3Q9BXE9 311 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 KIAA1586Q9HCI6 787 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 MARCH5Q9NX47 278 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 CNTN3Q9P232 1028 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 TUBGCP4Q9UGJ1 667 aa18.77■□□□□ 0.6
HDAC7-227ENST00000548080 TTC26A0AVF1 554 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 EXTL3O43909 919 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 ALDH2P05091 517 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 TPM1P09493 284 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 PPM1AP35813 382 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 MCCD1P59942 119 aaPredicted RBP18.77■□□□□ 0.59
HDAC7-227ENST00000548080 BFSP1Q12934 665 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 TUSC3Q13454 348 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 SNRNP35Q16560 246 aaKnown RBP18.77■□□□□ 0.59
HDAC7-227ENST00000548080 XKR4Q5GH76 650 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 PLPP4Q5VZY2 271 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 LRRC8AQ8IWT6 810 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 CACTINQ8WUQ7 758 aaKnown RBP18.77■□□□□ 0.59
HDAC7-227ENST00000548080 AUTS2Q8WXX7 1259 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 KIF12Q96FN5 646 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 TMEM175Q9BSA9 504 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 NUP58Q9BVL2 599 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 STXBP5LQ9Y2K9 1186 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 COL6A3P12111 3177 aa18.77■□□□□ 0.59
HDAC7-227ENST00000548080 AKR1B15C9JRZ8 316 aaPredicted RBP18.76■□□□□ 0.59
HDAC7-227ENST00000548080 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
HDAC7-227ENST00000548080 CA8P35219 290 aa18.76■□□□□ 0.59
HDAC7-227ENST00000548080 VAMP7P51809 220 aa18.76■□□□□ 0.59
HDAC7-227ENST00000548080 JADE1Q6IE81 842 aa18.76■□□□□ 0.59
HDAC7-227ENST00000548080 CBWD2Q8IUF1 395 aa18.76■□□□□ 0.59
HDAC7-227ENST00000548080 SIK3Q9Y2K2 1263 aa18.76■□□□□ 0.59
HDAC7-227ENST00000548080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.76■□□□□ 0.59
HDAC7-227ENST00000548080 ZNF233A6NK53 670 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 KIF4AO95239 1232 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 GYPCP04921 128 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 ADRB2P07550 413 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 NFICP08651 508 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 KCNE1P15382 129 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 CLCNKBP51801 687 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 PLCB3Q01970 1234 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 KRT17Q04695 432 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 PTPROQ16827 1216 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 TAS1R1Q7RTX1 841 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 ADGRD2Q7Z7M1 963 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 MICAL1Q8TDZ2 1067 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 IQCDQ96DY2 449 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 B3GALT6Q96L58 329 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 MFSD14AQ96MC6 490 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 KCNF1Q9H3M0 494 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 ENTPD7Q9NQZ7 604 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 TLR9Q9NR96 1032 aa18.75■□□□□ 0.59
HDAC7-227ENST00000548080 CASP14P31944 242 aa18.74■□□□□ 0.59
HDAC7-227ENST00000548080 GTF2F1P35269 517 aaKnown RBP eCLIP18.74■□□□□ 0.592e-7■■■■■ 30
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms