RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ALG1L2C9J202 215 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 AMY1AP04745 511 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 NHLH2Q02577 135 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 PTPN21Q16825 1174 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 PDZD4Q76G19 769 aaPredicted RBP3.11□□□□□ -1.91
CEP290-204ENST00000547926 TEKT5Q96M29 485 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 SENP6Q9GZR1 1112 aaPredicted RBP3.11□□□□□ -1.91
CEP290-204ENST00000547926 POGKQ9P215 609 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 SLC23A1Q9UHI7 598 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 ACTL7AQ9Y615 435 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 SHTN1A0MZ66 631 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 RAP2AP10114 183 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 DDX6P26196 483 aaKnown RBP eCLIP3.11□□□□□ -1.91
CEP290-204ENST00000547926 CCKBRP32239 447 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 CLRN1P58418 232 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 RAP2BP61225 183 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 MPP3Q13368 585 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 METRNLQ641Q3 311 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 EFCAB12Q6NXP0 572 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 DRICH1Q6PGQ1 229 aaPredicted RBP3.11□□□□□ -1.91
CEP290-204ENST00000547926 FAM180AQ6UWF9 173 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 RHOT1Q8IXI2 618 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 PHACTR3Q96KR7 559 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 ZNF48Q96MX3 618 aaPredicted RBP3.11□□□□□ -1.91
CEP290-204ENST00000547926 MRI1Q9BV20 369 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 LANCL2Q9NS86 450 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 SERPINB13Q9UIV8 391 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 ZNF580Q9UK33 172 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 LIMCH1Q9UPQ0 1083 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 RUVBL1Q9Y265 456 aaKnown RBP3.11□□□□□ -1.91
CEP290-204ENST00000547926 DRGXA6NNA5 263 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 ENDOD1O94919 500 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 EDNRBP24530 442 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 BMPR1AP36894 532 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 RARRES1P49788 294 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 CHN2P52757 468 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 SP140Q13342 867 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 C3orf36Q3SXR2 165 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 BRDTQ58F21 947 aaPredicted RBP3.1□□□□□ -1.91
CEP290-204ENST00000547926 ATXN7L2Q5T6C5 722 aaPredicted RBP3.1□□□□□ -1.91
CEP290-204ENST00000547926 FAM102AQ5T9C2 384 aaPredicted RBP3.1□□□□□ -1.91
CEP290-204ENST00000547926 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.1□□□□□ -1.91
CEP290-204ENST00000547926 FOXJ2Q9P0K8 574 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 PCDHA13Q9Y5I0 950 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 MAST3O60307 1309 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 MARCH11A6NNE9 402 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 PJA2O43164 708 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 GPR32O75388 356 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 PRSS23O95084 383 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 ATP8B2P98198 1209 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 RESTQ13127 1097 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 MTM1Q13496 603 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 FHL1Q13642 323 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 IL10RAQ13651 578 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 UBE3BQ7Z3V4 1068 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 PNMA8AQ86V59 439 aaPredicted RBP3.1□□□□□ -1.91
CEP290-204ENST00000547926 ZFP28Q8NHY6 868 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 ZCRB1Q8TBF4 217 aaKnown RBP3.1□□□□□ -1.91
CEP290-204ENST00000547926 SSH1Q8WYL5 1049 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 Q96MF0 132 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 C7orf25Q9BPX7 421 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 HOMER2Q9NSB8 354 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 FBXO34Q9NWN3 711 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 IPPQ9Y573 584 aa3.1□□□□□ -1.91
CEP290-204ENST00000547926 MYBBP1AQ9BQG0 1328 aaKnown RBP3.09□□□□□ -1.91
CEP290-204ENST00000547926 FAM171A2A8MVW0 826 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 HTRA2O43464 458 aaPredicted RBP3.09□□□□□ -1.91
CEP290-204ENST00000547926 ZRANB2O95218 330 aaKnown RBP eCLIP3.09□□□□□ -1.91
CEP290-204ENST00000547926 NTN1O95631 604 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 CELA2AP08217 269 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 SNRPA1P09661 255 aaKnown RBP3.09□□□□□ -1.91
CEP290-204ENST00000547926 IL2RBP14784 551 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 ATP5JP18859 108 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 DDCP20711 480 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 SLC6A2P23975 617 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 KIF23Q02241 960 aaPredicted RBP3.09□□□□□ -1.91
CEP290-204ENST00000547926 TARDBPQ13148 414 aaKnown RBP eCLIP3.09□□□□□ -1.91
CEP290-204ENST00000547926 RRP12Q5JTH9 1297 aaKnown RBP3.09□□□□□ -1.91
CEP290-204ENST00000547926 ABHD17BQ5VST6 288 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 ZNF529Q6P280 563 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 MED25Q71SY5 747 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 GPR149Q86SP6 731 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 ADGRE3Q9BY15 652 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 TMEM140Q9NV12 185 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 MOCS1Q9NZB8 636 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 CLCA2Q9UQC9 943 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 NOP58Q9Y2X3 529 aaKnown RBP3.09□□□□□ -1.91
CEP290-204ENST00000547926 USP15Q9Y4E8 981 aaPredicted RBP3.09□□□□□ -1.91
CEP290-204ENST00000547926 MRFAP1Q9Y605 127 aa3.09□□□□□ -1.91
CEP290-204ENST00000547926 CCDC78A2IDD5 438 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 MANSC4A6NHS7 340 aaPredicted RBP3.08□□□□□ -1.92
CEP290-204ENST00000547926 CCDC154A6NI56 674 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 IGKV2-30P06310 120 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 MGAT1P26572 445 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 WASP42768 502 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 KRT85P78386 507 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 UBXN2BQ14CS0 331 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 GJC2Q5T442 439 aaPredicted RBP3.08□□□□□ -1.92
CEP290-204ENST00000547926 OTUD7BQ6GQQ9 843 aa3.08□□□□□ -1.92
CEP290-204ENST00000547926 DCBLD1Q8N8Z6 715 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms