RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CLIC2O15247 247 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 RHOBTB3O94955 611 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 MCM4P33991 863 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 SNRPFP62306 86 aaKnown RBP20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 PDXDC1Q6P996 788 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 HS2ST1Q7LGA3 356 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 PALB2Q86YC2 1186 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 C12orf76Q8N812 135 aaPredicted RBP20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 CCDC47Q96A33 483 aaKnown RBP20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 SUSD3Q96L08 255 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 CLSTN3Q9BQT9 956 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 DZANK1Q9NVP4 752 aa20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 USP15Q9Y4E8 981 aaPredicted RBP20.3■□□□□ 0.84
PRPF40B-206ENST00000547764 PPEF2O14830 753 aa20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 GADD45BO75293 160 aaPredicted RBP20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 GLUD1P00367 558 aa20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 C9orf57Q5W0N0 161 aa20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 NT5DC4Q86YG4 428 aa20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 CBWD2Q8IUF1 395 aa20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 DPP3Q9NY33 737 aa20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 CGNQ9P2M7 1197 aaKnown RBP20.29■□□□□ 0.84
PRPF40B-206ENST00000547764 ANO9A1A5B4 782 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 ZNF233A6NK53 670 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 PIRO00625 290 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 SYN3O14994 580 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 ADAM12O43184 909 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 TGM5O43548 720 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 SPATA31D3P0C874 917 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 CYP2J2P51589 502 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 PNOCQ13519 176 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 KCNB1Q14721 858 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 LILRA6Q6PI73 481 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 SPATA31D4Q6ZUB0 917 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 ANKS3Q6ZW76 656 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 SUSD6Q92537 303 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 TIGD1Q96MW7 591 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 ADAM7Q9H2U9 754 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 KIAA1586Q9HCI6 787 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 PDE11AQ9HCR9 933 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 MAN1C1Q9NR34 630 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 MTRRQ9UBK8 725 aa20.28■□□□□ 0.84
PRPF40B-206ENST00000547764 PLXNA3P51805 1871 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 C1RP00736 705 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 AARSP49588 968 aaKnown RBP eCLIP20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 TFAMQ00059 246 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 ITIH3Q06033 890 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 VARS2Q5ST30 1063 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 RARS2Q5T160 578 aaKnown RBP20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 RSPO2Q6UXX9 243 aaPredicted RBP20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 C12orf56Q8IXR9 622 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 RDH13Q8NBN7 331 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 KCTD10Q9H3F6 313 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 CDH22Q9UJ99 828 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 PCDHB8Q9UN66 801 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 BACE2Q9Y5Z0 518 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 NCOR1O75376 2440 aa20.27■□□□□ 0.84
PRPF40B-206ENST00000547764 CUL9Q8IWT3 2517 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 C5orf42Q9H799 3197 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 SPDYE4A6NLX3 237 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 M0QZQ0 153 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 OR1D2P34982 312 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 LILRA4P59901 499 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 MRPL58Q14197 206 aaKnown RBP20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 SNRNP35Q16560 246 aaKnown RBP20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 CES5AQ6NT32 575 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 TMC5Q6UXY8 1006 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 XXYLT1Q8NBI6 393 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 GOLGA5Q8TBA6 731 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 FEZF2Q8TBJ5 459 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 CACTINQ8WUQ7 758 aaKnown RBP20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 FAM84AQ96KN4 292 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 SFXN1Q9H9B4 322 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 PRKAG3Q9UGI9 489 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 DPP7Q9UHL4 492 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 CDY1Q9Y6F8 540 aa20.26■□□□□ 0.83
PRPF40B-206ENST00000547764 SPTLC1O15269 473 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 WEE2P0C1S8 567 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 ZP2Q05996 745 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 RAB33AQ14088 237 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 CBX2Q14781 532 aaPredicted RBP20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 DSTYKQ6XUX3 929 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 ADHFE1Q8IWW8 467 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 KREMEN2Q8NCW0 462 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 APPL2Q8NEU8 664 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 HDAC7Q8WUI4 952 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 PLEKHA4Q9H4M7 779 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 MAPK8IP1Q9UQF2 711 aa20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 TIMM13Q9Y5L4 95 aaPredicted RBP20.25■□□□□ 0.83
PRPF40B-206ENST00000547764 H7C4K7 107 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 PDXKO00764 312 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 TBC1D4O60343 1298 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 KIF20AO95235 890 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 PAX3P23760 479 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 SURF1Q15526 300 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 LMBRD2Q68DH5 695 aaPredicted RBP20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 ELMSAN1Q6PJG2 1045 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 C1orf127Q8N9H9 656 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 ERCC4Q92889 916 aaPredicted RBP20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 SENP8Q96LD8 212 aa20.24■□□□□ 0.83
PRPF40B-206ENST00000547764 CD320Q9NPF0 282 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms