RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 BUB1O43683 1085 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 CAND2O75155 1236 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 LSM8O95777 96 aaKnown RBP14.38□□□□□ -0.11
PTCH1-215ENST00000547672 CST3P01034 146 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-215ENST00000547672 ATP1A1P05023 1023 aaKnown RBP14.38□□□□□ -0.11
PTCH1-215ENST00000547672 KRT19P08727 400 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-215ENST00000547672 MYL6P60660 151 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 MRPS6P82932 125 aaKnown RBP14.38□□□□□ -0.11
PTCH1-215ENST00000547672 SLC10A6Q3KNW5 377 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 MEI1Q5TIA1 1274 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 JADE1Q6IE81 842 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 TMEM270Q6UE05 265 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 RUFY4Q6ZNE9 571 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 PEX26Q7Z412 305 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 SLC47A2Q86VL8 602 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 ARRDC4Q8NCT1 418 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 TPCN2Q8NHX9 752 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 SLC35G2Q8TBE7 412 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 KAT5Q92993 513 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 OSMRQ99650 979 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 DPP3Q9NY33 737 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 DDX20Q9UHI6 824 aaKnown RBP14.38□□□□□ -0.11
PTCH1-215ENST00000547672 AMFRQ9UKV5 643 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 NUB1Q9Y5A7 615 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 PTPRJQ12913 1337 aa14.38□□□□□ -0.11
PTCH1-215ENST00000547672 GRID2IPA4D2P6 1211 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 ENC1O14682 589 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 TLR3O15455 904 aaKnown RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 ADAMTS4O75173 837 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 TADA3O75528 432 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 CAPN15O75808 1086 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 MTA2O94776 668 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 NPTXRO95502 500 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 PGK1P00558 417 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 PAEPP09466 180 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 SKIP12755 728 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 CHRNB2P17787 502 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 ACO1P21399 889 aaKnown RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 GNA15P30679 374 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 HOXA11P31270 313 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 NSFP46459 744 aaKnown RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 FMO1Q01740 532 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 KCNA10Q16322 511 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 CLEC16AQ2KHT3 1053 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 MAP3K21Q5TCX8 1036 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 CXCL17Q6UXB2 119 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 SLFN11Q7Z7L1 901 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 SERINC5Q86VE9 423 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 GPIHBP1Q8IV16 184 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 USP38Q8NB14 1042 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 RBBP8NLQ8NC74 664 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 MSANTD4Q8NCY6 345 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 DDX1Q92499 740 aaKnown RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 LENG1Q96BZ8 264 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 KIF12Q96FN5 646 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 PPP1R16BQ96T49 567 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 APOBEC3GQ9HC16 384 aaKnown RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 MRPL47Q9HD33 250 aaKnown RBP14.37□□□□□ -0.11
PTCH1-215ENST00000547672 CTTNBP2NLQ9P2B4 639 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 GTF3C4Q9UKN8 822 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 TFR2Q9UP52 801 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 SQORQ9Y6N5 450 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 CAPN6Q9Y6Q1 641 aa14.37□□□□□ -0.11
PTCH1-215ENST00000547672 TMCO5BA8MYB1 307 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
PTCH1-215ENST00000547672 CSDE1O75534 798 aaKnown RBP14.36□□□□□ -0.11
PTCH1-215ENST00000547672 CYP1A2P05177 515 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 ASGR1P07306 291 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 MMEP08473 750 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 FAM163BP0C2L3 166 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 PNPLA4P41247 253 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 WNT7BP56706 349 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 TNNC1P63316 161 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 PTK7Q13308 1070 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 STILQ15468 1287 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 TAF3Q5VWG9 929 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 DAAM2Q86T65 1068 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 EFCAB13Q8IY85 973 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 LRRC52Q8N7C0 313 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 SLC20A1Q8WUM9 679 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 HPDLQ96IR7 371 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 RPS6KC1Q96S38 1066 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 OSBPL9Q96SU4 736 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 NAP1L3Q99457 506 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-215ENST00000547672 PLVAPQ9BX97 442 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 PACSIN1Q9BY11 444 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 MIS12Q9H081 205 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 HMX1Q9NP08 348 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-215ENST00000547672 AVENQ9NQS1 362 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-215ENST00000547672 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.111e-16■■■■■ 250
PTCH1-215ENST00000547672 CISHQ9NSE2 258 aa14.36□□□□□ -0.11
PTCH1-215ENST00000547672 UBQLN1Q9UMX0 589 aaKnown RBP14.36□□□□□ -0.11
PTCH1-215ENST00000547672 PIN4Q9Y237 131 aaKnown RBP14.36□□□□□ -0.11
PTCH1-215ENST00000547672 A0A0U1RQG5 324 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-215ENST00000547672 FANCGO15287 622 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms