RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 PTP4A2Q12974 167 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 DRP2Q13474 957 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 NCOA4Q13772 614 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 PHF13Q86YI8 300 aaPredicted RBP16.54■□□□□ 0.24
BRF1-212ENST00000547562 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 PGM2Q96G03 612 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 PAGR1Q9BTK6 254 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 PPANQ9NQ55 473 aaKnown RBP16.54■□□□□ 0.24
BRF1-212ENST00000547562 PAEPP09466 180 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 CALCOCO2Q13137 446 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 MAMLD1Q13495 774 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 BYSLQ13895 437 aaKnown RBP16.54■□□□□ 0.24
BRF1-212ENST00000547562 METTL7BQ6UX53 244 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 NCAPG2Q86XI2 1143 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 SPATS2Q86XZ4 545 aaKnown RBP16.54■□□□□ 0.24
BRF1-212ENST00000547562 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
BRF1-212ENST00000547562 SEPT1Q8WYJ6 367 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 MRPL47Q9HD33 250 aaKnown RBP16.54■□□□□ 0.24
BRF1-212ENST00000547562 CHST7Q9NS84 486 aa16.54■□□□□ 0.24
BRF1-212ENST00000547562 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 TRAPPC3O43617 180 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 MAN1A1P33908 653 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 EFNA5P52803 228 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 SNX1Q13596 522 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 PPP1R2P3Q6NXS1 205 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 BRSK2Q8IWQ3 736 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 HERPUD2Q9BSE4 406 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 CNOT10Q9H9A5 744 aaKnown RBP16.53■□□□□ 0.24
BRF1-212ENST00000547562 WHRNQ9P202 907 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 ATXN2Q99700 1313 aaKnown RBP16.53■□□□□ 0.24
BRF1-212ENST00000547562 RIPK2O43353 540 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 THAP12O43422 761 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 PSTPIP1O43586 416 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 FAM189A1O60320 539 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 MSCO60682 206 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 FGFR4P22455 802 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 SSTR3P32745 418 aaPredicted RBP16.53■□□□□ 0.24
BRF1-212ENST00000547562 AP3M2P53677 418 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 PPARDQ03181 441 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 UBAP2Q5T6F2 1119 aaKnown RBP16.53■□□□□ 0.24
BRF1-212ENST00000547562 DAB2IPQ5VWQ8 1189 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 PLEKHA7Q6IQ23 1121 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.53■□□□□ 0.24
BRF1-212ENST00000547562 ATG4AQ8WYN0 398 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 SCINQ9Y6U3 715 aa16.53■□□□□ 0.24
BRF1-212ENST00000547562 GMNCA6NCL1 334 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 TP73O15350 636 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 TOM1L1O75674 476 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 TNFSF9P41273 254 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 ZNF132P52740 706 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
BRF1-212ENST00000547562 LY6KQ17RY6 165 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 SCARA3Q6AZY7 606 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 MMS22LQ6ZRQ5 1243 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 SYDE1Q6ZW31 735 aaPredicted RBP16.52■□□□□ 0.24
BRF1-212ENST00000547562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.52■□□□□ 0.24
BRF1-212ENST00000547562 EEPD1Q7L9B9 569 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 CROCCP2Q86T23 111 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 WDR49Q8IV35 697 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 RHOT1Q8IXI2 618 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 FAM167AQ96KS9 214 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 TMEM109Q9BVC6 243 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 MRPL4Q9BYD3 311 aaKnown RBP16.52■□□□□ 0.24
BRF1-212ENST00000547562 DCLK3Q9C098 648 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 CCDC113Q9H0I3 377 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 TMEM51Q9NW97 253 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 PPME1Q9Y570 386 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 CSADQ9Y600 493 aa16.52■□□□□ 0.24
BRF1-212ENST00000547562 ASS1P00966 412 aaKnown RBP16.51■□□□□ 0.23
BRF1-212ENST00000547562 ADCY2Q08462 1091 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 GRM1Q13255 1194 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 GADL1Q6ZQY3 521 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 UBR7Q8N806 425 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 C3orf20Q8ND61 904 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 GRK7Q8WTQ7 553 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 AZI2Q9H6S1 392 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 ASIC3Q9UHC3 531 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 A0A087WUV0 522 aaPredicted RBP16.51■□□□□ 0.23
BRF1-212ENST00000547562 TLDC2A0PJX2 215 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 O00370 1275 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 CST3P01034 146 aaPredicted RBP16.51■□□□□ 0.23
BRF1-212ENST00000547562 ITIH2P19823 946 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 CDR1P51861 262 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 TAS2R40P59535 323 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 KLF1Q13351 362 aaPredicted RBP16.51■□□□□ 0.23
BRF1-212ENST00000547562 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
BRF1-212ENST00000547562 PTK6Q13882 451 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 C6orf118Q5T5N4 469 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 IER5Q5VY09 327 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 CDCA2Q69YH5 1023 aaPredicted RBP16.51■□□□□ 0.23
BRF1-212ENST00000547562 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 NLGN2Q8NFZ4 835 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 ZNF606Q8WXB4 792 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 PPM1EQ8WY54 764 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 TCHPQ9BT92 498 aa16.51■□□□□ 0.23
BRF1-212ENST00000547562 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
BRF1-212ENST00000547562 RGS16O15492 202 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms