RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 KLK7P49862 253 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 MFAP3P55082 362 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 MYL6P60660 151 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 NOP14P78316 857 aaKnown RBP17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 GCNT1Q02742 428 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 TSR1Q2NL82 804 aaKnown RBP17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 ZNF667Q5HYK9 610 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 C9orf57Q5W0N0 161 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 ZNF365Q70YC5 407 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 JAKMIP2Q96AA8 810 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 HPDLQ96IR7 371 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 GANQ9H2C0 597 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 FAM124BQ9H5Z6 455 aaPredicted RBP17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 TUBGCP4Q9UGJ1 667 aa17.03■□□□□ 0.32
TRAFD1-203ENST00000547063 ZBBXA8MT70 800 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 AKR1B15C9JRZ8 316 aaPredicted RBP17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 PIRO00625 290 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 POMCP01189 267 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 GYPCP04921 128 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 POLR2FP61218 127 aaKnown RBP17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 YWHAEP62258 255 aaKnown RBP17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 ZBED6P86452 979 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 NAB2Q15742 525 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 PTPN21Q16825 1174 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 TMEM240Q5SV17 173 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 OTOP2Q7RTS6 562 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 LRRC43Q8N309 656 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 PPM1KQ8N3J5 372 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 CXorf38Q8TB03 319 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 HERVK_113Q902F9 699 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 CASD1Q96PB1 797 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 SPAG5Q96R06 1193 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 TTYH3Q9C0H2 523 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 CXCL16Q9H2A7 254 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 SIX2Q9NPC8 291 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 RNF19AQ9NV58 838 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 MIOSQ9NXC5 875 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.32
TRAFD1-203ENST00000547063 TBKBP1A7MCY6 615 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 DGKIO75912 1065 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 NOL4O94818 638 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 UPP2O95045 317 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 CASP14P31944 242 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 TAF6P49848 677 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 GUCY2FP51841 1108 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 SOX4Q06945 474 aaPredicted RBP17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 LRMPQ12912 555 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 SV2CQ496J9 727 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 PHLDB3Q6NSJ2 640 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 DPY19L2P1Q6NXN4 242 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 TTC39CQ8N584 583 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 PHOSPHO2Q8TCD6 241 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 CPLX3Q8WVH0 158 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 SLC9A7Q96T83 725 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 PI4K2AQ9BTU6 479 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 STK33Q9BYT3 514 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 NIF3L1Q9GZT8 377 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 XYLT2Q9H1B5 865 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 TBC1D13Q9NVG8 400 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 DNAJC12Q9UKB3 198 aa17.01■□□□□ 0.31
TRAFD1-203ENST00000547063 ARHGEF37A1IGU5 675 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 PODXLO00592 558 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 NRDCO43847 1150 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 CCDC172P0C7W6 258 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 AFF1P51825 1210 aaKnown RBP17■□□□□ 0.31
TRAFD1-203ENST00000547063 TNNC1P63316 161 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 DSC1Q08554 894 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 RAPGEF1Q13905 1077 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 WDR72Q3MJ13 1102 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 OR8K1Q8NGG5 319 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 BUD13Q9BRD0 619 aaKnown RBP eCLIP17■□□□□ 0.31
TRAFD1-203ENST00000547063 NAA15Q9BXJ9 866 aaKnown RBP17■□□□□ 0.31
TRAFD1-203ENST00000547063 CYP3A43Q9HB55 503 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 NLRC4Q9NPP4 1024 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 ZNHIT6Q9NWK9 470 aaKnown RBP17■□□□□ 0.31
TRAFD1-203ENST00000547063 FHOD1Q9Y613 1164 aa17■□□□□ 0.31
TRAFD1-203ENST00000547063 EPHB6O15197 1021 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 MFAP3LO75121 409 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 KRT9P35527 623 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 DEFB103AP81534 67 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 CUL2Q13617 745 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 UPP1Q16831 310 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 IQCEQ6IPM2 695 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 DCLRE1AQ6PJP8 1040 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 ARHGEF19Q8IW93 802 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 CMTR2Q8IYT2 770 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 SYN2Q92777 582 aaPredicted RBP16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 TATDN2Q93075 761 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 DNAI2Q9GZS0 605 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 GDAP2Q9NXN4 497 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
TRAFD1-203ENST00000547063 SLC4A7Q9Y6M7 1214 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms